Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 ZNF890P-202ENST00000530367 1156 ntBASIC18.53■□□□□ 0.56
VTA1Q9NP79 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.53■□□□□ 0.56
VTA1Q9NP79 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.53■□□□□ 0.56
VTA1Q9NP79 AC024267.1-201ENST00000582320 895 ntBASIC18.53■□□□□ 0.56
VTA1Q9NP79 AL512652.2-201ENST00000625156 1716 ntBASIC18.53■□□□□ 0.56
VTA1Q9NP79 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VTA1Q9NP79 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VTA1Q9NP79 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VTA1Q9NP79 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.53■□□□□ 0.56
VTA1Q9NP79 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
VTA1Q9NP79 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
VTA1Q9NP79 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VTA1Q9NP79 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.53■□□□□ 0.56
VTA1Q9NP79 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VTA1Q9NP79 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
VTA1Q9NP79 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
VTA1Q9NP79 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.52■□□□□ 0.56
VTA1Q9NP79 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VTA1Q9NP79 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
VTA1Q9NP79 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VTA1Q9NP79 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.52■□□□□ 0.56
VTA1Q9NP79 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.52■□□□□ 0.56
VTA1Q9NP79 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
VTA1Q9NP79 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.52■□□□□ 0.56
VTA1Q9NP79 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.52■□□□□ 0.56
VTA1Q9NP79 AL596325.1-201ENST00000563991 1082 ntBASIC18.52■□□□□ 0.56
VTA1Q9NP79 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.52■□□□□ 0.56
VTA1Q9NP79 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
VTA1Q9NP79 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VTA1Q9NP79 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.52■□□□□ 0.56
VTA1Q9NP79 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VTA1Q9NP79 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.52■□□□□ 0.56
VTA1Q9NP79 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.52■□□□□ 0.56
VTA1Q9NP79 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
VTA1Q9NP79 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VTA1Q9NP79 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VTA1Q9NP79 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VTA1Q9NP79 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.52■□□□□ 0.55
VTA1Q9NP79 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
VTA1Q9NP79 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
VTA1Q9NP79 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.52■□□□□ 0.55
VTA1Q9NP79 AL023806.1-201ENST00000603994 1649 ntBASIC18.52■□□□□ 0.55
VTA1Q9NP79 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
VTA1Q9NP79 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
VTA1Q9NP79 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
VTA1Q9NP79 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
VTA1Q9NP79 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.52■□□□□ 0.55
VTA1Q9NP79 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
VTA1Q9NP79 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.51■□□□□ 0.55
VTA1Q9NP79 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VTA1Q9NP79 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VTA1Q9NP79 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
VTA1Q9NP79 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VTA1Q9NP79 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
VTA1Q9NP79 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
VTA1Q9NP79 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VTA1Q9NP79 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
VTA1Q9NP79 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VTA1Q9NP79 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
VTA1Q9NP79 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
VTA1Q9NP79 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
VTA1Q9NP79 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VTA1Q9NP79 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
VTA1Q9NP79 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.51■□□□□ 0.55
VTA1Q9NP79 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.51■□□□□ 0.55
VTA1Q9NP79 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.51■□□□□ 0.55
VTA1Q9NP79 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.51■□□□□ 0.55
VTA1Q9NP79 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.51■□□□□ 0.55
VTA1Q9NP79 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.51■□□□□ 0.55
VTA1Q9NP79 AC007613.1-201ENST00000572811 2597 ntBASIC18.51■□□□□ 0.55
VTA1Q9NP79 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
VTA1Q9NP79 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
VTA1Q9NP79 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
VTA1Q9NP79 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
VTA1Q9NP79 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VTA1Q9NP79 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
VTA1Q9NP79 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VTA1Q9NP79 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VTA1Q9NP79 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VTA1Q9NP79 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.5■□□□□ 0.55
VTA1Q9NP79 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
VTA1Q9NP79 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.5■□□□□ 0.55
VTA1Q9NP79 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VTA1Q9NP79 AL589702.1-201ENST00000641229 1509 ntBASIC18.5■□□□□ 0.55
VTA1Q9NP79 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.5■□□□□ 0.55
VTA1Q9NP79 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VTA1Q9NP79 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.5■□□□□ 0.55
VTA1Q9NP79 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
VTA1Q9NP79 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
VTA1Q9NP79 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
VTA1Q9NP79 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
VTA1Q9NP79 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VTA1Q9NP79 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VTA1Q9NP79 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
VTA1Q9NP79 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
VTA1Q9NP79 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VTA1Q9NP79 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.5■□□□□ 0.55
VTA1Q9NP79 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.5■□□□□ 0.55
VTA1Q9NP79 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
VTA1Q9NP79 RN7SL692P-201ENST00000464677 288 ntBASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms