Protein–RNA interactions for Protein: Q9HD34

LYRM4, LYR motif-containing protein 4, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM4Q9HD34 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYRM4Q9HD34 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LYRM4Q9HD34 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.65■□□□□ 0.1
LYRM4Q9HD34 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYRM4Q9HD34 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.65■□□□□ 0.1
LYRM4Q9HD34 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
LYRM4Q9HD34 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYRM4Q9HD34 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYRM4Q9HD34 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.65■□□□□ 0.1
LYRM4Q9HD34 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
LYRM4Q9HD34 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
LYRM4Q9HD34 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LYRM4Q9HD34 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYRM4Q9HD34 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYRM4Q9HD34 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYRM4Q9HD34 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LYRM4Q9HD34 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYRM4Q9HD34 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LYRM4Q9HD34 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.65■□□□□ 0.1
LYRM4Q9HD34 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.65■□□□□ 0.1
LYRM4Q9HD34 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.65■□□□□ 0.1
LYRM4Q9HD34 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LYRM4Q9HD34 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
LYRM4Q9HD34 AC092902.6-201ENST00000641783 218 ntBASIC15.65■□□□□ 0.1
LYRM4Q9HD34 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.65■□□□□ 0.1
LYRM4Q9HD34 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYRM4Q9HD34 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYRM4Q9HD34 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYRM4Q9HD34 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
LYRM4Q9HD34 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LYRM4Q9HD34 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.65■□□□□ 0.1
LYRM4Q9HD34 ME2P1-201ENST00000426028 1970 ntBASIC15.65■□□□□ 0.1
LYRM4Q9HD34 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LYRM4Q9HD34 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.65■□□□□ 0.1
LYRM4Q9HD34 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.65■□□□□ 0.1
LYRM4Q9HD34 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LYRM4Q9HD34 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LYRM4Q9HD34 AKAP8P1-201ENST00000434743 1349 ntBASIC15.65■□□□□ 0.1
LYRM4Q9HD34 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
LYRM4Q9HD34 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LYRM4Q9HD34 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LYRM4Q9HD34 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LYRM4Q9HD34 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
LYRM4Q9HD34 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.64■□□□□ 0.1
LYRM4Q9HD34 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 AC016027.1-202ENST00000607927 1699 ntBASIC15.64■□□□□ 0.09
LYRM4Q9HD34 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 POU5F1P6-201ENST00000466990 990 ntBASIC15.64■□□□□ 0.09
LYRM4Q9HD34 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 FAM86C2P-203ENST00000528684 1004 ntBASIC15.64■□□□□ 0.09
LYRM4Q9HD34 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 RARRES2P8-201ENST00000566335 367 ntBASIC15.64■□□□□ 0.09
LYRM4Q9HD34 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.64■□□□□ 0.09
LYRM4Q9HD34 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYRM4Q9HD34 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
LYRM4Q9HD34 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.63■□□□□ 0.09
LYRM4Q9HD34 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LYRM4Q9HD34 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
LYRM4Q9HD34 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LYRM4Q9HD34 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms