Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.2■□□□□ 0.34
USP29Q9HBJ7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.2■□□□□ 0.34
USP29Q9HBJ7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP29Q9HBJ7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.2■□□□□ 0.34
USP29Q9HBJ7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.2■□□□□ 0.34
USP29Q9HBJ7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.2■□□□□ 0.34
USP29Q9HBJ7 AC002347.1-201ENST00000569543 541 ntBASIC17.2■□□□□ 0.34
USP29Q9HBJ7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.2■□□□□ 0.34
USP29Q9HBJ7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.2■□□□□ 0.34
USP29Q9HBJ7 AC008667.4-201ENST00000607370 168 ntBASIC17.2■□□□□ 0.34
USP29Q9HBJ7 GGTLC5P-201ENST00000617623 998 ntBASIC17.2■□□□□ 0.34
USP29Q9HBJ7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.2■□□□□ 0.34
USP29Q9HBJ7 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.2■□□□□ 0.34
USP29Q9HBJ7 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP29Q9HBJ7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP29Q9HBJ7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP29Q9HBJ7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.2■□□□□ 0.34
USP29Q9HBJ7 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.2■□□□□ 0.34
USP29Q9HBJ7 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP29Q9HBJ7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP29Q9HBJ7 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP29Q9HBJ7 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
USP29Q9HBJ7 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.2■□□□□ 0.34
USP29Q9HBJ7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP29Q9HBJ7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP29Q9HBJ7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.19■□□□□ 0.34
USP29Q9HBJ7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP29Q9HBJ7 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.19■□□□□ 0.34
USP29Q9HBJ7 AL031731.1-201ENST00000642131 2094 ntBASIC17.19■□□□□ 0.34
USP29Q9HBJ7 GGT4P-201ENST00000623672 1708 ntBASIC17.19■□□□□ 0.34
USP29Q9HBJ7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP29Q9HBJ7 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.19■□□□□ 0.34
USP29Q9HBJ7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.19■□□□□ 0.34
USP29Q9HBJ7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
USP29Q9HBJ7 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.19■□□□□ 0.34
USP29Q9HBJ7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.19■□□□□ 0.34
USP29Q9HBJ7 YBX2P1-201ENST00000394192 760 ntBASIC17.19■□□□□ 0.34
USP29Q9HBJ7 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.19■□□□□ 0.34
USP29Q9HBJ7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.19■□□□□ 0.34
USP29Q9HBJ7 RPSAP43-201ENST00000402237 625 ntBASIC17.19■□□□□ 0.34
USP29Q9HBJ7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.19■□□□□ 0.34
USP29Q9HBJ7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
USP29Q9HBJ7 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
USP29Q9HBJ7 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.19■□□□□ 0.34
USP29Q9HBJ7 AC009947.1-201ENST00000444350 727 ntBASIC17.19■□□□□ 0.34
USP29Q9HBJ7 AC136632.2-201ENST00000512891 861 ntBASIC17.19■□□□□ 0.34
USP29Q9HBJ7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
USP29Q9HBJ7 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.19■□□□□ 0.34
USP29Q9HBJ7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.19■□□□□ 0.34
USP29Q9HBJ7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
USP29Q9HBJ7 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP29Q9HBJ7 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP29Q9HBJ7 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP29Q9HBJ7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
USP29Q9HBJ7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP29Q9HBJ7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
USP29Q9HBJ7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP29Q9HBJ7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
USP29Q9HBJ7 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP29Q9HBJ7 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP29Q9HBJ7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP29Q9HBJ7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.19■□□□□ 0.34
USP29Q9HBJ7 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
USP29Q9HBJ7 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP29Q9HBJ7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
USP29Q9HBJ7 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP29Q9HBJ7 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
USP29Q9HBJ7 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.18■□□□□ 0.34
USP29Q9HBJ7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.18■□□□□ 0.34
USP29Q9HBJ7 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP29Q9HBJ7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP29Q9HBJ7 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP29Q9HBJ7 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.18■□□□□ 0.34
USP29Q9HBJ7 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
USP29Q9HBJ7 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP29Q9HBJ7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP29Q9HBJ7 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
USP29Q9HBJ7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.18■□□□□ 0.34
USP29Q9HBJ7 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.18■□□□□ 0.34
USP29Q9HBJ7 IGHV3-65-201ENST00000523210 341 ntBASIC17.18■□□□□ 0.34
USP29Q9HBJ7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
USP29Q9HBJ7 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.18■□□□□ 0.34
USP29Q9HBJ7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
USP29Q9HBJ7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.18■□□□□ 0.34
USP29Q9HBJ7 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.18■□□□□ 0.34
USP29Q9HBJ7 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP29Q9HBJ7 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
USP29Q9HBJ7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
USP29Q9HBJ7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP29Q9HBJ7 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP29Q9HBJ7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
USP29Q9HBJ7 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.18■□□□□ 0.34
USP29Q9HBJ7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
USP29Q9HBJ7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
USP29Q9HBJ7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP29Q9HBJ7 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.18■□□□□ 0.34
USP29Q9HBJ7 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP29Q9HBJ7 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP29Q9HBJ7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
USP29Q9HBJ7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms