Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 AC092364.2-201ENST00000596710 2692 ntBASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
LRRC40Q9H9A6 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
LRRC40Q9H9A6 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.3
LRRC40Q9H9A6 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.96■□□□□ 0.3
LRRC40Q9H9A6 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
LRRC40Q9H9A6 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.96■□□□□ 0.3
LRRC40Q9H9A6 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRRC40Q9H9A6 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.96■□□□□ 0.3
LRRC40Q9H9A6 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.96■□□□□ 0.3
LRRC40Q9H9A6 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRRC40Q9H9A6 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC40Q9H9A6 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC40Q9H9A6 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC40Q9H9A6 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC40Q9H9A6 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.95■□□□□ 0.3
LRRC40Q9H9A6 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC40Q9H9A6 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC40Q9H9A6 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
LRRC40Q9H9A6 AL391005.1-201ENST00000623953 2435 ntBASIC16.95■□□□□ 0.3
LRRC40Q9H9A6 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.95■□□□□ 0.3
LRRC40Q9H9A6 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC40Q9H9A6 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.95■□□□□ 0.3
LRRC40Q9H9A6 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC40Q9H9A6 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.95■□□□□ 0.3
LRRC40Q9H9A6 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC40Q9H9A6 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.95■□□□□ 0.3
LRRC40Q9H9A6 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
LRRC40Q9H9A6 OR7E47P-204ENST00000575924 449 ntBASIC16.95■□□□□ 0.3
LRRC40Q9H9A6 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC40Q9H9A6 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.95■□□□□ 0.3
LRRC40Q9H9A6 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.95■□□□□ 0.3
LRRC40Q9H9A6 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC40Q9H9A6 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
LRRC40Q9H9A6 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.95■□□□□ 0.3
LRRC40Q9H9A6 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC40Q9H9A6 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.95■□□□□ 0.3
LRRC40Q9H9A6 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC40Q9H9A6 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.95■□□□□ 0.3
LRRC40Q9H9A6 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC40Q9H9A6 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC40Q9H9A6 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC40Q9H9A6 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
LRRC40Q9H9A6 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC40Q9H9A6 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC40Q9H9A6 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 AL513523.2-202ENST00000427283 2040 ntBASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 GGT4P-201ENST00000623672 1708 ntBASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 PRSS29P-201ENST00000440800 595 ntBASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 AC108751.1-201ENST00000490852 363 ntBASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 AC093909.1-201ENST00000504731 1122 ntBASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 AL049840.3-201ENST00000602669 611 ntBASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC40Q9H9A6 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms