Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
RSPO3Q9BXY4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RSPO3Q9BXY4 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RSPO3Q9BXY4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
RSPO3Q9BXY4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.29■□□□□ 0.04
RSPO3Q9BXY4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RSPO3Q9BXY4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO3Q9BXY4 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO3Q9BXY4 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.28■□□□□ 0.04
RSPO3Q9BXY4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO3Q9BXY4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.28■□□□□ 0.04
RSPO3Q9BXY4 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RSPO3Q9BXY4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO3Q9BXY4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RSPO3Q9BXY4 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO3Q9BXY4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.28■□□□□ 0.04
RSPO3Q9BXY4 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.28■□□□□ 0.04
RSPO3Q9BXY4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.28■□□□□ 0.04
RSPO3Q9BXY4 HCG4-201ENST00000418983 998 ntBASIC15.28■□□□□ 0.04
RSPO3Q9BXY4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.28■□□□□ 0.04
RSPO3Q9BXY4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.28■□□□□ 0.04
RSPO3Q9BXY4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO3Q9BXY4 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.28■□□□□ 0.04
RSPO3Q9BXY4 RN7SL510P-201ENST00000581311 263 ntBASIC15.28■□□□□ 0.04
RSPO3Q9BXY4 LINC01711-201ENST00000598340 967 ntBASIC15.28■□□□□ 0.04
RSPO3Q9BXY4 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.28■□□□□ 0.04
RSPO3Q9BXY4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO3Q9BXY4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RSPO3Q9BXY4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO3Q9BXY4 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.28■□□□□ 0.04
RSPO3Q9BXY4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO3Q9BXY4 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO3Q9BXY4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.28■□□□□ 0.04
RSPO3Q9BXY4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RSPO3Q9BXY4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.27■□□□□ 0.04
RSPO3Q9BXY4 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RSPO3Q9BXY4 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RSPO3Q9BXY4 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
RSPO3Q9BXY4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RSPO3Q9BXY4 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RSPO3Q9BXY4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
RSPO3Q9BXY4 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RSPO3Q9BXY4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RSPO3Q9BXY4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RSPO3Q9BXY4 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RSPO3Q9BXY4 CDC14C-201ENST00000428251 1719 ntBASIC15.27■□□□□ 0.04
RSPO3Q9BXY4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.27■□□□□ 0.04
RSPO3Q9BXY4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RSPO3Q9BXY4 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RSPO3Q9BXY4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
RSPO3Q9BXY4 MRPL3P1-201ENST00000400109 1033 ntBASIC15.27■□□□□ 0.04
RSPO3Q9BXY4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RSPO3Q9BXY4 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.27■□□□□ 0.04
RSPO3Q9BXY4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.27■□□□□ 0.04
RSPO3Q9BXY4 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RSPO3Q9BXY4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RSPO3Q9BXY4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.27■□□□□ 0.04
RSPO3Q9BXY4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.27■□□□□ 0.04
RSPO3Q9BXY4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.27■□□□□ 0.03
RSPO3Q9BXY4 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.27■□□□□ 0.03
RSPO3Q9BXY4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RSPO3Q9BXY4 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.27■□□□□ 0.03
RSPO3Q9BXY4 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.27■□□□□ 0.03
RSPO3Q9BXY4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC15.27■□□□□ 0.03
RSPO3Q9BXY4 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.27■□□□□ 0.03
RSPO3Q9BXY4 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
RSPO3Q9BXY4 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RSPO3Q9BXY4 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RSPO3Q9BXY4 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RSPO3Q9BXY4 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RSPO3Q9BXY4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
RSPO3Q9BXY4 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RSPO3Q9BXY4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RSPO3Q9BXY4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RSPO3Q9BXY4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RSPO3Q9BXY4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RSPO3Q9BXY4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.26■□□□□ 0.03
RSPO3Q9BXY4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.26■□□□□ 0.03
RSPO3Q9BXY4 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RSPO3Q9BXY4 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RSPO3Q9BXY4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.26■□□□□ 0.03
RSPO3Q9BXY4 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
RSPO3Q9BXY4 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.26■□□□□ 0.03
RSPO3Q9BXY4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.26■□□□□ 0.03
RSPO3Q9BXY4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.26■□□□□ 0.03
RSPO3Q9BXY4 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.26■□□□□ 0.03
RSPO3Q9BXY4 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RSPO3Q9BXY4 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RSPO3Q9BXY4 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.26■□□□□ 0.03
RSPO3Q9BXY4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.26■□□□□ 0.03
RSPO3Q9BXY4 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.26■□□□□ 0.03
RSPO3Q9BXY4 POU5F1P6-201ENST00000466990 990 ntBASIC15.26■□□□□ 0.03
RSPO3Q9BXY4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
RSPO3Q9BXY4 AP002469.2-201ENST00000531724 424 ntBASIC15.26■□□□□ 0.03
RSPO3Q9BXY4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.26■□□□□ 0.03
RSPO3Q9BXY4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.26■□□□□ 0.03
RSPO3Q9BXY4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
RSPO3Q9BXY4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.26■□□□□ 0.03
RSPO3Q9BXY4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.26■□□□□ 0.03
RSPO3Q9BXY4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms