Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 IGHGP-201ENST00000390555 1178 ntBASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 IGHV3-52-201ENST00000519770 353 ntBASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 AC006538.1-201ENST00000567905 1585 ntBASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP4Q9BWG4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 AC019129.2-201ENST00000609837 1235 ntBASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 AC013268.4-201ENST00000637413 2228 ntBASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 EGFEM1P-202ENST00000431685 1563 ntBASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 AC010460.3-201ENST00000511359 1579 ntBASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 AL353692.3-201ENST00000407031 1396 ntBASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 AL645728.1-201ENST00000366221 2101 ntBASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SSBP4Q9BWG4 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms