Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.23■□□□□ 0.03
NPAS1Q99742 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS1Q99742 PCDHA1-201ENST00000378133 2726 ntBASIC15.23■□□□□ 0.03
NPAS1Q99742 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS1Q99742 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS1Q99742 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
NPAS1Q99742 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
NPAS1Q99742 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.23■□□□□ 0.03
NPAS1Q99742 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.23■□□□□ 0.03
NPAS1Q99742 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
NPAS1Q99742 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS1Q99742 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS1Q99742 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
NPAS1Q99742 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS1Q99742 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS1Q99742 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS1Q99742 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.22■□□□□ 0.03
NPAS1Q99742 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
NPAS1Q99742 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS1Q99742 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS1Q99742 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS1Q99742 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS1Q99742 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
NPAS1Q99742 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS1Q99742 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS1Q99742 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS1Q99742 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS1Q99742 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.22■□□□□ 0.03
NPAS1Q99742 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS1Q99742 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS1Q99742 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.22■□□□□ 0.03
NPAS1Q99742 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
NPAS1Q99742 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS1Q99742 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.22■□□□□ 0.03
NPAS1Q99742 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.22■□□□□ 0.03
NPAS1Q99742 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.22■□□□□ 0.03
NPAS1Q99742 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.22■□□□□ 0.03
NPAS1Q99742 AC091167.2-201ENST00000579581 588 ntBASIC15.22■□□□□ 0.03
NPAS1Q99742 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS1Q99742 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS1Q99742 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.22■□□□□ 0.03
NPAS1Q99742 CYP2A7P1-201ENST00000595391 815 ntBASIC15.22■□□□□ 0.03
NPAS1Q99742 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS1Q99742 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS1Q99742 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
NPAS1Q99742 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS1Q99742 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS1Q99742 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.22■□□□□ 0.03
NPAS1Q99742 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
NPAS1Q99742 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.22■□□□□ 0.03
NPAS1Q99742 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS1Q99742 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS1Q99742 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS1Q99742 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.22■□□□□ 0.03
NPAS1Q99742 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.22■□□□□ 0.03
NPAS1Q99742 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS1Q99742 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS1Q99742 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS1Q99742 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS1Q99742 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
NPAS1Q99742 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPAS1Q99742 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
NPAS1Q99742 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPAS1Q99742 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPAS1Q99742 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPAS1Q99742 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NPAS1Q99742 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NPAS1Q99742 PMS2P7-201ENST00000506558 1336 ntBASIC15.21■□□□□ 0.03
NPAS1Q99742 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPAS1Q99742 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
NPAS1Q99742 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPAS1Q99742 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NPAS1Q99742 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NPAS1Q99742 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NPAS1Q99742 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPAS1Q99742 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPAS1Q99742 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
NPAS1Q99742 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
NPAS1Q99742 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPAS1Q99742 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPAS1Q99742 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NPAS1Q99742 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPAS1Q99742 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.21■□□□□ 0.03
NPAS1Q99742 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPAS1Q99742 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.21■□□□□ 0.03
NPAS1Q99742 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
NPAS1Q99742 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.21■□□□□ 0.03
NPAS1Q99742 MIR4515-201ENST00000584082 81 ntBASIC15.21■□□□□ 0.03
NPAS1Q99742 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPAS1Q99742 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.21■□□□□ 0.03
NPAS1Q99742 AC023141.13-201ENST00000604991 943 ntBASIC15.21■□□□□ 0.03
NPAS1Q99742 AC013467.2-201ENST00000605472 835 ntBASIC15.21■□□□□ 0.03
NPAS1Q99742 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.21■□□□□ 0.03
NPAS1Q99742 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.21■□□□□ 0.03
NPAS1Q99742 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NPAS1Q99742 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPAS1Q99742 AC012569.1-201ENST00000591191 1524 ntBASIC15.21■□□□□ 0.03
NPAS1Q99742 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NPAS1Q99742 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
NPAS1Q99742 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.21■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms