Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LITAFQ99732 POR-201ENST00000394893 2532 ntTSL 5 BASIC11.11□□□□□ -0.63
LITAFQ99732 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC11.11□□□□□ -0.63
LITAFQ99732 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
LITAFQ99732 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC11.11□□□□□ -0.63
LITAFQ99732 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
LITAFQ99732 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
LITAFQ99732 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC11.11□□□□□ -0.63
LITAFQ99732 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LITAFQ99732 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
LITAFQ99732 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
LITAFQ99732 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LITAFQ99732 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC11.11□□□□□ -0.63
LITAFQ99732 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
LITAFQ99732 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC11.11□□□□□ -0.63
LITAFQ99732 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC11.11□□□□□ -0.63
LITAFQ99732 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
LITAFQ99732 AP002414.1-201ENST00000391405 1147 ntBASIC11.11□□□□□ -0.63
LITAFQ99732 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
LITAFQ99732 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC11.11□□□□□ -0.63
LITAFQ99732 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC11.11□□□□□ -0.63
LITAFQ99732 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC11.11□□□□□ -0.63
LITAFQ99732 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC11.11□□□□□ -0.63
LITAFQ99732 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC11.11□□□□□ -0.63
LITAFQ99732 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC11.11□□□□□ -0.63
LITAFQ99732 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC11.11□□□□□ -0.63
LITAFQ99732 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LITAFQ99732 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
LITAFQ99732 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC11.11□□□□□ -0.63
LITAFQ99732 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
LITAFQ99732 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC11.11□□□□□ -0.63
LITAFQ99732 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LITAFQ99732 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LITAFQ99732 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LITAFQ99732 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LITAFQ99732 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC11.11□□□□□ -0.63
LITAFQ99732 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
LITAFQ99732 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LITAFQ99732 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC11.11□□□□□ -0.63
LITAFQ99732 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC11.11□□□□□ -0.63
LITAFQ99732 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LITAFQ99732 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LITAFQ99732 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LITAFQ99732 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
LITAFQ99732 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LITAFQ99732 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC11.11□□□□□ -0.63
LITAFQ99732 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LITAFQ99732 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LITAFQ99732 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC11.1□□□□□ -0.63
LITAFQ99732 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LITAFQ99732 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LITAFQ99732 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC11.1□□□□□ -0.63
LITAFQ99732 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LITAFQ99732 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LITAFQ99732 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC11.1□□□□□ -0.63
LITAFQ99732 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LITAFQ99732 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
LITAFQ99732 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LITAFQ99732 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
LITAFQ99732 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
LITAFQ99732 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LITAFQ99732 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
LITAFQ99732 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC11.1□□□□□ -0.63
LITAFQ99732 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LITAFQ99732 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
LITAFQ99732 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
LITAFQ99732 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
LITAFQ99732 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LITAFQ99732 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LITAFQ99732 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
LITAFQ99732 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
LITAFQ99732 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LITAFQ99732 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LITAFQ99732 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC11.1□□□□□ -0.63
LITAFQ99732 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LITAFQ99732 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
LITAFQ99732 TSPY14P-201ENST00000303979 915 ntBASIC11.1□□□□□ -0.63
LITAFQ99732 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LITAFQ99732 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LITAFQ99732 ABHD17AP1-201ENST00000358206 933 ntBASIC11.1□□□□□ -0.63
LITAFQ99732 INGX-201ENST00000359239 846 ntBASIC11.1□□□□□ -0.63
LITAFQ99732 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LITAFQ99732 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
LITAFQ99732 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
LITAFQ99732 PARL-206ENST00000435888 1098 ntTSL 5 BASIC11.1□□□□□ -0.63
LITAFQ99732 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC11.1□□□□□ -0.63
LITAFQ99732 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LITAFQ99732 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC11.1□□□□□ -0.63
LITAFQ99732 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC11.1□□□□□ -0.63
LITAFQ99732 AC034232.1-201ENST00000506026 1064 ntBASIC11.1□□□□□ -0.63
LITAFQ99732 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC11.1□□□□□ -0.63
LITAFQ99732 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC11.1□□□□□ -0.63
LITAFQ99732 RPS20-210ENST00000523936 899 ntTSL 2 BASIC11.1□□□□□ -0.63
LITAFQ99732 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC11.1□□□□□ -0.63
LITAFQ99732 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC11.1□□□□□ -0.63
LITAFQ99732 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
LITAFQ99732 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC11.1□□□□□ -0.63
LITAFQ99732 AC113410.3-201ENST00000623366 203 ntBASIC11.1□□□□□ -0.63
LITAFQ99732 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LITAFQ99732 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms