Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NDNQ99608 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NDNQ99608 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NDNQ99608 AC026691.1-201ENST00000602502 2017 ntBASIC16.8■□□□□ 0.28
NDNQ99608 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.8■□□□□ 0.28
NDNQ99608 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
NDNQ99608 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NDNQ99608 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NDNQ99608 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NDNQ99608 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NDNQ99608 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NDNQ99608 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NDNQ99608 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NDNQ99608 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.79■□□□□ 0.28
NDNQ99608 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.79■□□□□ 0.28
NDNQ99608 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NDNQ99608 AC006449.5-201ENST00000610658 2098 ntBASIC16.79■□□□□ 0.28
NDNQ99608 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NDNQ99608 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
NDNQ99608 AC007950.2-201ENST00000615045 2347 ntBASIC16.79■□□□□ 0.28
NDNQ99608 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
NDNQ99608 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
NDNQ99608 LINC00895-201ENST00000629028 1637 ntBASIC16.79■□□□□ 0.28
NDNQ99608 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
NDNQ99608 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NDNQ99608 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NDNQ99608 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.79■□□□□ 0.28
NDNQ99608 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.79■□□□□ 0.28
NDNQ99608 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.79■□□□□ 0.28
NDNQ99608 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.79■□□□□ 0.28
NDNQ99608 PAWRP1-201ENST00000451083 565 ntBASIC16.79■□□□□ 0.28
NDNQ99608 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.79■□□□□ 0.28
NDNQ99608 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NDNQ99608 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.79■□□□□ 0.28
NDNQ99608 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.79■□□□□ 0.28
NDNQ99608 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.79■□□□□ 0.28
NDNQ99608 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NDNQ99608 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NDNQ99608 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NDNQ99608 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NDNQ99608 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NDNQ99608 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NDNQ99608 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NDNQ99608 TCAF2P1-201ENST00000291129 2421 ntBASIC16.79■□□□□ 0.28
NDNQ99608 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NDNQ99608 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NDNQ99608 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
NDNQ99608 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NDNQ99608 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NDNQ99608 PI4KAP1-204ENST00000612579 1703 ntBASIC16.79■□□□□ 0.28
NDNQ99608 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.79■□□□□ 0.28
NDNQ99608 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.78■□□□□ 0.28
NDNQ99608 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NDNQ99608 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.78■□□□□ 0.28
NDNQ99608 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NDNQ99608 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NDNQ99608 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NDNQ99608 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NDNQ99608 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NDNQ99608 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.78■□□□□ 0.28
NDNQ99608 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NDNQ99608 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NDNQ99608 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NDNQ99608 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NDNQ99608 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NDNQ99608 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.78■□□□□ 0.28
NDNQ99608 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.78■□□□□ 0.28
NDNQ99608 AC087163.2-201ENST00000457299 853 ntBASIC16.78■□□□□ 0.28
NDNQ99608 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.78■□□□□ 0.28
NDNQ99608 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.78■□□□□ 0.28
NDNQ99608 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.78■□□□□ 0.28
NDNQ99608 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.78■□□□□ 0.28
NDNQ99608 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.78■□□□□ 0.28
NDNQ99608 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NDNQ99608 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.78■□□□□ 0.28
NDNQ99608 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NDNQ99608 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NDNQ99608 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
NDNQ99608 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.78■□□□□ 0.28
NDNQ99608 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.78■□□□□ 0.28
NDNQ99608 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.78■□□□□ 0.28
NDNQ99608 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
NDNQ99608 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NDNQ99608 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NDNQ99608 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NDNQ99608 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NDNQ99608 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NDNQ99608 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.77■□□□□ 0.28
NDNQ99608 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NDNQ99608 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NDNQ99608 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
NDNQ99608 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NDNQ99608 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
NDNQ99608 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.77■□□□□ 0.28
NDNQ99608 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NDNQ99608 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NDNQ99608 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
NDNQ99608 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.77■□□□□ 0.28
NDNQ99608 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.77■□□□□ 0.28
NDNQ99608 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms