Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
NECTIN4Q96NY8 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NECTIN4Q96NY8 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NECTIN4Q96NY8 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NECTIN4Q96NY8 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.16■□□□□ 0.34
NECTIN4Q96NY8 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.16■□□□□ 0.34
NECTIN4Q96NY8 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NECTIN4Q96NY8 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.16■□□□□ 0.34
NECTIN4Q96NY8 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.16■□□□□ 0.34
NECTIN4Q96NY8 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NECTIN4Q96NY8 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NECTIN4Q96NY8 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NECTIN4Q96NY8 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.16■□□□□ 0.34
NECTIN4Q96NY8 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.16■□□□□ 0.34
NECTIN4Q96NY8 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.16■□□□□ 0.34
NECTIN4Q96NY8 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
NECTIN4Q96NY8 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.16■□□□□ 0.34
NECTIN4Q96NY8 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.16■□□□□ 0.34
NECTIN4Q96NY8 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.16■□□□□ 0.34
NECTIN4Q96NY8 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.16■□□□□ 0.34
NECTIN4Q96NY8 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.16■□□□□ 0.34
NECTIN4Q96NY8 AC099568.2-201ENST00000609194 695 ntBASIC17.16■□□□□ 0.34
NECTIN4Q96NY8 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
NECTIN4Q96NY8 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NECTIN4Q96NY8 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NECTIN4Q96NY8 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NECTIN4Q96NY8 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
NECTIN4Q96NY8 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NECTIN4Q96NY8 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
NECTIN4Q96NY8 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NECTIN4Q96NY8 AC138932.1-201ENST00000534164 6830 ntBASIC17.16■□□□□ 0.34
NECTIN4Q96NY8 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN4Q96NY8 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN4Q96NY8 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN4Q96NY8 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.15■□□□□ 0.34
NECTIN4Q96NY8 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
NECTIN4Q96NY8 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN4Q96NY8 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.15■□□□□ 0.34
NECTIN4Q96NY8 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.15■□□□□ 0.34
NECTIN4Q96NY8 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN4Q96NY8 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.15■□□□□ 0.34
NECTIN4Q96NY8 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
NECTIN4Q96NY8 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.15■□□□□ 0.34
NECTIN4Q96NY8 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN4Q96NY8 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.15■□□□□ 0.34
NECTIN4Q96NY8 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
NECTIN4Q96NY8 AL512361.1-201ENST00000554200 418 ntBASIC17.15■□□□□ 0.34
NECTIN4Q96NY8 AC044860.1-202ENST00000559481 777 ntBASIC17.15■□□□□ 0.34
NECTIN4Q96NY8 AC026979.3-201ENST00000607315 403 ntBASIC17.15■□□□□ 0.34
NECTIN4Q96NY8 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.15■□□□□ 0.34
NECTIN4Q96NY8 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN4Q96NY8 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN4Q96NY8 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN4Q96NY8 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN4Q96NY8 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
NECTIN4Q96NY8 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN4Q96NY8 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.15■□□□□ 0.34
NECTIN4Q96NY8 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.15■□□□□ 0.34
NECTIN4Q96NY8 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.15■□□□□ 0.34
NECTIN4Q96NY8 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN4Q96NY8 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN4Q96NY8 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN4Q96NY8 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN4Q96NY8 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NECTIN4Q96NY8 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.14■□□□□ 0.34
NECTIN4Q96NY8 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.14■□□□□ 0.34
NECTIN4Q96NY8 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
NECTIN4Q96NY8 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NECTIN4Q96NY8 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.14■□□□□ 0.33
NECTIN4Q96NY8 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
NECTIN4Q96NY8 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NECTIN4Q96NY8 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.14■□□□□ 0.33
NECTIN4Q96NY8 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NECTIN4Q96NY8 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
NECTIN4Q96NY8 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.14■□□□□ 0.33
NECTIN4Q96NY8 AC108860.2-201ENST00000562760 2183 ntBASIC17.14■□□□□ 0.33
NECTIN4Q96NY8 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NECTIN4Q96NY8 SLC25A1P3-201ENST00000395415 828 ntBASIC17.14■□□□□ 0.33
NECTIN4Q96NY8 RN7SL837P-201ENST00000463010 287 ntBASIC17.14■□□□□ 0.33
NECTIN4Q96NY8 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NECTIN4Q96NY8 AC024267.1-201ENST00000582320 895 ntBASIC17.14■□□□□ 0.33
NECTIN4Q96NY8 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.14■□□□□ 0.33
NECTIN4Q96NY8 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
NECTIN4Q96NY8 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.14■□□□□ 0.33
NECTIN4Q96NY8 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NECTIN4Q96NY8 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NECTIN4Q96NY8 AC020916.1-201ENST00000587762 1774 ntBASIC17.14■□□□□ 0.33
NECTIN4Q96NY8 HTR7P1-202ENST00000624664 4411 ntBASIC17.14■□□□□ 0.33
NECTIN4Q96NY8 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NECTIN4Q96NY8 AC012317.2-201ENST00000623305 2251 ntBASIC17.14■□□□□ 0.33
NECTIN4Q96NY8 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NECTIN4Q96NY8 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
NECTIN4Q96NY8 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.14■□□□□ 0.33
NECTIN4Q96NY8 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.14■□□□□ 0.33
NECTIN4Q96NY8 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
NECTIN4Q96NY8 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
NECTIN4Q96NY8 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NECTIN4Q96NY8 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms