Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
ATP2A3Q93084 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
ATP2A3Q93084 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.6■□□□□ 0.41
ATP2A3Q93084 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATP2A3Q93084 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.6■□□□□ 0.41
ATP2A3Q93084 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.6■□□□□ 0.41
ATP2A3Q93084 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.6■□□□□ 0.41
ATP2A3Q93084 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.6■□□□□ 0.41
ATP2A3Q93084 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.6■□□□□ 0.41
ATP2A3Q93084 AL645728.2-201ENST00000641974 660 ntBASIC17.6■□□□□ 0.41
ATP2A3Q93084 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ATP2A3Q93084 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.6■□□□□ 0.41
ATP2A3Q93084 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.6■□□□□ 0.41
ATP2A3Q93084 AC092919.2-201ENST00000623631 1645 ntBASIC17.6■□□□□ 0.41
ATP2A3Q93084 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP2A3Q93084 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP2A3Q93084 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP2A3Q93084 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP2A3Q93084 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
ATP2A3Q93084 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATP2A3Q93084 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP2A3Q93084 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
ATP2A3Q93084 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
ATP2A3Q93084 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP2A3Q93084 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP2A3Q93084 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP2A3Q93084 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
ATP2A3Q93084 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.59■□□□□ 0.41
ATP2A3Q93084 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP2A3Q93084 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
ATP2A3Q93084 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.59■□□□□ 0.41
ATP2A3Q93084 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.59■□□□□ 0.41
ATP2A3Q93084 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.59■□□□□ 0.41
ATP2A3Q93084 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.59■□□□□ 0.41
ATP2A3Q93084 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.59■□□□□ 0.41
ATP2A3Q93084 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.59■□□□□ 0.41
ATP2A3Q93084 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.59■□□□□ 0.41
ATP2A3Q93084 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP2A3Q93084 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.59■□□□□ 0.41
ATP2A3Q93084 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.59■□□□□ 0.41
ATP2A3Q93084 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.59■□□□□ 0.41
ATP2A3Q93084 AC105339.1-204ENST00000636249 355 ntBASIC17.59■□□□□ 0.41
ATP2A3Q93084 AL139384.1-201ENST00000612143 3047 ntBASIC17.59■□□□□ 0.41
ATP2A3Q93084 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.59■□□□□ 0.41
ATP2A3Q93084 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP2A3Q93084 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ATP2A3Q93084 AL118508.1-201ENST00000613502 2345 ntBASIC17.59■□□□□ 0.41
ATP2A3Q93084 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ATP2A3Q93084 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP2A3Q93084 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP2A3Q93084 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.59■□□□□ 0.41
ATP2A3Q93084 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP2A3Q93084 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ATP2A3Q93084 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
ATP2A3Q93084 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
ATP2A3Q93084 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ATP2A3Q93084 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
ATP2A3Q93084 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ATP2A3Q93084 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.58■□□□□ 0.41
ATP2A3Q93084 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.58■□□□□ 0.41
ATP2A3Q93084 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.58■□□□□ 0.41
ATP2A3Q93084 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
ATP2A3Q93084 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP2A3Q93084 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ATP2A3Q93084 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP2A3Q93084 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.58■□□□□ 0.4
ATP2A3Q93084 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.4
ATP2A3Q93084 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.58■□□□□ 0.4
ATP2A3Q93084 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
ATP2A3Q93084 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
ATP2A3Q93084 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.58■□□□□ 0.4
ATP2A3Q93084 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
ATP2A3Q93084 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.58■□□□□ 0.4
ATP2A3Q93084 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.58■□□□□ 0.4
ATP2A3Q93084 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP2A3Q93084 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.58■□□□□ 0.4
ATP2A3Q93084 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.58■□□□□ 0.4
ATP2A3Q93084 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.58■□□□□ 0.4
ATP2A3Q93084 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.58■□□□□ 0.4
ATP2A3Q93084 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP2A3Q93084 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.58■□□□□ 0.4
ATP2A3Q93084 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
ATP2A3Q93084 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP2A3Q93084 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP2A3Q93084 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP2A3Q93084 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP2A3Q93084 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.57■□□□□ 0.4
ATP2A3Q93084 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A3Q93084 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A3Q93084 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A3Q93084 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
ATP2A3Q93084 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A3Q93084 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.57■□□□□ 0.4
ATP2A3Q93084 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
ATP2A3Q93084 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A3Q93084 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A3Q93084 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.57■□□□□ 0.4
ATP2A3Q93084 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A3Q93084 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A3Q93084 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms