Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.33□□□□□ -0.12
USP9XQ93008 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.33□□□□□ -0.12
USP9XQ93008 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.33□□□□□ -0.12
USP9XQ93008 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
USP9XQ93008 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
USP9XQ93008 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
USP9XQ93008 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
USP9XQ93008 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.33□□□□□ -0.12
USP9XQ93008 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.32□□□□□ -0.12
USP9XQ93008 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
USP9XQ93008 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
USP9XQ93008 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.32□□□□□ -0.12
USP9XQ93008 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.32□□□□□ -0.12
USP9XQ93008 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
USP9XQ93008 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
USP9XQ93008 TDH-203ENST00000531764 1110 ntBASIC14.32□□□□□ -0.12
USP9XQ93008 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.32□□□□□ -0.12
USP9XQ93008 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.32□□□□□ -0.12
USP9XQ93008 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
USP9XQ93008 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
USP9XQ93008 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
USP9XQ93008 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC14.32□□□□□ -0.12
USP9XQ93008 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
USP9XQ93008 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
USP9XQ93008 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
USP9XQ93008 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.32□□□□□ -0.12
USP9XQ93008 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC14.32□□□□□ -0.12
USP9XQ93008 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
USP9XQ93008 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
USP9XQ93008 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.32□□□□□ -0.12
USP9XQ93008 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
USP9XQ93008 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
USP9XQ93008 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.32□□□□□ -0.12
USP9XQ93008 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
USP9XQ93008 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
USP9XQ93008 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
USP9XQ93008 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
USP9XQ93008 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.32□□□□□ -0.12
USP9XQ93008 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC14.32□□□□□ -0.12
USP9XQ93008 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC14.32□□□□□ -0.12
USP9XQ93008 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.32□□□□□ -0.12
USP9XQ93008 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.32□□□□□ -0.12
USP9XQ93008 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.32□□□□□ -0.12
USP9XQ93008 AL022328.3-201ENST00000607943 679 ntBASIC14.32□□□□□ -0.12
USP9XQ93008 AC091271.1-201ENST00000611877 1162 ntBASIC14.32□□□□□ -0.12
USP9XQ93008 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
USP9XQ93008 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
USP9XQ93008 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
USP9XQ93008 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.32□□□□□ -0.12
USP9XQ93008 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
USP9XQ93008 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
USP9XQ93008 CLK3P2-201ENST00000427566 1453 ntBASIC14.32□□□□□ -0.12
USP9XQ93008 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.32□□□□□ -0.12
USP9XQ93008 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
USP9XQ93008 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
USP9XQ93008 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
USP9XQ93008 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
USP9XQ93008 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.32□□□□□ -0.12
USP9XQ93008 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
USP9XQ93008 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.31□□□□□ -0.12
USP9XQ93008 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
USP9XQ93008 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
USP9XQ93008 AL162726.2-201ENST00000438986 1017 ntBASIC14.31□□□□□ -0.12
USP9XQ93008 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.31□□□□□ -0.12
USP9XQ93008 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.31□□□□□ -0.12
USP9XQ93008 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
USP9XQ93008 AP001258.2-201ENST00000529891 490 ntBASIC14.31□□□□□ -0.12
USP9XQ93008 AC079316.1-201ENST00000548397 411 ntBASIC14.31□□□□□ -0.12
USP9XQ93008 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.31□□□□□ -0.12
USP9XQ93008 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.31□□□□□ -0.12
USP9XQ93008 AL136301.1-201ENST00000615830 422 ntBASIC14.31□□□□□ -0.12
USP9XQ93008 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
USP9XQ93008 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
USP9XQ93008 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC14.31□□□□□ -0.12
USP9XQ93008 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
USP9XQ93008 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
USP9XQ93008 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
USP9XQ93008 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
USP9XQ93008 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
USP9XQ93008 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
USP9XQ93008 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
USP9XQ93008 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
USP9XQ93008 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.31□□□□□ -0.12
USP9XQ93008 CHMP4BP1-201ENST00000556017 588 ntBASIC14.31□□□□□ -0.12
USP9XQ93008 RN7SL560P-201ENST00000577943 264 ntBASIC14.31□□□□□ -0.12
USP9XQ93008 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
USP9XQ93008 CU634019.7-201ENST00000624153 1185 ntBASIC14.31□□□□□ -0.12
USP9XQ93008 FP236241.2-201ENST00000624906 1185 ntBASIC14.31□□□□□ -0.12
USP9XQ93008 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.31□□□□□ -0.12
USP9XQ93008 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
USP9XQ93008 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
USP9XQ93008 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
USP9XQ93008 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
USP9XQ93008 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.31□□□□□ -0.12
USP9XQ93008 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
USP9XQ93008 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
USP9XQ93008 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
USP9XQ93008 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.31□□□□□ -0.12
USP9XQ93008 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC14.31□□□□□ -0.12
USP9XQ93008 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms