Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SEMA4DQ92854 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SEMA4DQ92854 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.91■□□□□ 0.46
SEMA4DQ92854 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SEMA4DQ92854 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SEMA4DQ92854 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.91■□□□□ 0.46
SEMA4DQ92854 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.91■□□□□ 0.46
SEMA4DQ92854 AC140658.5-201ENST00000438532 169 ntBASIC17.91■□□□□ 0.46
SEMA4DQ92854 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SEMA4DQ92854 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.91■□□□□ 0.46
SEMA4DQ92854 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.91■□□□□ 0.46
SEMA4DQ92854 KRT18P58-201ENST00000527480 1120 ntBASIC17.91■□□□□ 0.46
SEMA4DQ92854 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.91■□□□□ 0.46
SEMA4DQ92854 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.91■□□□□ 0.46
SEMA4DQ92854 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.91■□□□□ 0.46
SEMA4DQ92854 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SEMA4DQ92854 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SEMA4DQ92854 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SEMA4DQ92854 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SEMA4DQ92854 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SEMA4DQ92854 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SEMA4DQ92854 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.91■□□□□ 0.46
SEMA4DQ92854 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SEMA4DQ92854 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SEMA4DQ92854 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SEMA4DQ92854 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SEMA4DQ92854 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SEMA4DQ92854 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SEMA4DQ92854 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SEMA4DQ92854 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SEMA4DQ92854 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SEMA4DQ92854 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SEMA4DQ92854 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SEMA4DQ92854 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.9■□□□□ 0.46
SEMA4DQ92854 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SEMA4DQ92854 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SEMA4DQ92854 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SEMA4DQ92854 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SEMA4DQ92854 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.9■□□□□ 0.46
SEMA4DQ92854 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
SEMA4DQ92854 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SEMA4DQ92854 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.9■□□□□ 0.46
SEMA4DQ92854 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.9■□□□□ 0.46
SEMA4DQ92854 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SEMA4DQ92854 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.9■□□□□ 0.46
SEMA4DQ92854 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SEMA4DQ92854 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.9■□□□□ 0.46
SEMA4DQ92854 AC074386.1-202ENST00000463561 864 ntBASIC17.9■□□□□ 0.46
SEMA4DQ92854 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.9■□□□□ 0.46
SEMA4DQ92854 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.9■□□□□ 0.46
SEMA4DQ92854 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SEMA4DQ92854 AP002472.1-201ENST00000577490 586 ntBASIC17.9■□□□□ 0.46
SEMA4DQ92854 MIR3909-201ENST00000579518 119 ntBASIC17.9■□□□□ 0.46
SEMA4DQ92854 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.9■□□□□ 0.46
SEMA4DQ92854 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SEMA4DQ92854 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SEMA4DQ92854 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SEMA4DQ92854 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.9■□□□□ 0.46
SEMA4DQ92854 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SEMA4DQ92854 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.9■□□□□ 0.46
SEMA4DQ92854 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SEMA4DQ92854 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.9■□□□□ 0.46
SEMA4DQ92854 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.9■□□□□ 0.46
SEMA4DQ92854 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SEMA4DQ92854 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SEMA4DQ92854 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.89■□□□□ 0.46
SEMA4DQ92854 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SEMA4DQ92854 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SEMA4DQ92854 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.89■□□□□ 0.45
SEMA4DQ92854 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SEMA4DQ92854 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SEMA4DQ92854 PCGF3-213ENST00000620529 1899 ntBASIC17.89■□□□□ 0.45
SEMA4DQ92854 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.89■□□□□ 0.45
SEMA4DQ92854 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SEMA4DQ92854 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SEMA4DQ92854 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SEMA4DQ92854 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
SEMA4DQ92854 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.89■□□□□ 0.45
SEMA4DQ92854 PMS2P4-201ENST00000412466 1052 ntBASIC17.89■□□□□ 0.45
SEMA4DQ92854 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.89■□□□□ 0.45
SEMA4DQ92854 AC092474.2-201ENST00000424288 719 ntBASIC17.89■□□□□ 0.45
SEMA4DQ92854 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.89■□□□□ 0.45
SEMA4DQ92854 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.89■□□□□ 0.45
SEMA4DQ92854 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SEMA4DQ92854 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.89■□□□□ 0.45
SEMA4DQ92854 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
SEMA4DQ92854 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.89■□□□□ 0.45
SEMA4DQ92854 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SEMA4DQ92854 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.89■□□□□ 0.45
SEMA4DQ92854 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SEMA4DQ92854 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SEMA4DQ92854 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SEMA4DQ92854 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SEMA4DQ92854 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SEMA4DQ92854 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SEMA4DQ92854 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SEMA4DQ92854 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SEMA4DQ92854 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SEMA4DQ92854 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SEMA4DQ92854 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms