Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.76■□□□□ 0.59
USP6NLQ92738 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.76■□□□□ 0.59
USP6NLQ92738 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP6NLQ92738 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC18.76■□□□□ 0.59
USP6NLQ92738 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP6NLQ92738 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.76■□□□□ 0.59
USP6NLQ92738 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.76■□□□□ 0.59
USP6NLQ92738 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.76■□□□□ 0.59
USP6NLQ92738 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
USP6NLQ92738 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP6NLQ92738 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP6NLQ92738 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP6NLQ92738 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP6NLQ92738 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP6NLQ92738 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
USP6NLQ92738 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP6NLQ92738 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP6NLQ92738 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP6NLQ92738 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP6NLQ92738 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USP6NLQ92738 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP6NLQ92738 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USP6NLQ92738 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
USP6NLQ92738 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
USP6NLQ92738 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP6NLQ92738 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP6NLQ92738 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP6NLQ92738 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP6NLQ92738 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP6NLQ92738 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP6NLQ92738 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.75■□□□□ 0.59
USP6NLQ92738 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP6NLQ92738 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
USP6NLQ92738 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP6NLQ92738 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
USP6NLQ92738 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.75■□□□□ 0.59
USP6NLQ92738 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USP6NLQ92738 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.75■□□□□ 0.59
USP6NLQ92738 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.75■□□□□ 0.59
USP6NLQ92738 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP6NLQ92738 AP006294.1-201ENST00000415407 339 ntBASIC18.75■□□□□ 0.59
USP6NLQ92738 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.75■□□□□ 0.59
USP6NLQ92738 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USP6NLQ92738 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
USP6NLQ92738 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.75■□□□□ 0.59
USP6NLQ92738 RNA5SP410-201ENST00000516285 106 ntBASIC18.75■□□□□ 0.59
USP6NLQ92738 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
USP6NLQ92738 WASH4P-201ENST00000564273 1246 ntBASIC18.75■□□□□ 0.59
USP6NLQ92738 AC106886.1-201ENST00000568660 600 ntBASIC18.75■□□□□ 0.59
USP6NLQ92738 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.75■□□□□ 0.59
USP6NLQ92738 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.75■□□□□ 0.59
USP6NLQ92738 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.75■□□□□ 0.59
USP6NLQ92738 AC013467.2-201ENST00000605472 835 ntBASIC18.75■□□□□ 0.59
USP6NLQ92738 MIR6799-201ENST00000620297 69 ntBASIC18.75■□□□□ 0.59
USP6NLQ92738 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.75■□□□□ 0.59
USP6NLQ92738 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.75■□□□□ 0.59
USP6NLQ92738 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP6NLQ92738 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.75■□□□□ 0.59
USP6NLQ92738 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP6NLQ92738 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
USP6NLQ92738 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USP6NLQ92738 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP6NLQ92738 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP6NLQ92738 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP6NLQ92738 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP6NLQ92738 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP6NLQ92738 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
USP6NLQ92738 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP6NLQ92738 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP6NLQ92738 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
USP6NLQ92738 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.74■□□□□ 0.59
USP6NLQ92738 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.74■□□□□ 0.59
USP6NLQ92738 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP6NLQ92738 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP6NLQ92738 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP6NLQ92738 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP6NLQ92738 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
USP6NLQ92738 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP6NLQ92738 SPDYE19P-201ENST00000338590 713 ntBASIC18.74■□□□□ 0.59
USP6NLQ92738 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
USP6NLQ92738 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
USP6NLQ92738 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.74■□□□□ 0.59
USP6NLQ92738 ACA64.2-201ENST00000459014 129 ntBASIC18.74■□□□□ 0.59
USP6NLQ92738 RN7SL752P-201ENST00000463779 287 ntBASIC18.74■□□□□ 0.59
USP6NLQ92738 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
USP6NLQ92738 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP6NLQ92738 AC093004.1-201ENST00000508850 424 ntBASIC18.74■□□□□ 0.59
USP6NLQ92738 SPDYE18-201ENST00000510091 1050 ntBASIC18.74■□□□□ 0.59
USP6NLQ92738 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.74■□□□□ 0.59
USP6NLQ92738 DOC2GP-202ENST00000514950 1163 ntBASIC18.74■□□□□ 0.59
USP6NLQ92738 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
USP6NLQ92738 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.74■□□□□ 0.59
USP6NLQ92738 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.74■□□□□ 0.59
USP6NLQ92738 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.74■□□□□ 0.59
USP6NLQ92738 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.74■□□□□ 0.59
USP6NLQ92738 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP6NLQ92738 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
USP6NLQ92738 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP6NLQ92738 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP6NLQ92738 AL671710.1-201ENST00000610245 2349 ntBASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms