Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 AC112492.5-201ENST00000421897 457 ntBASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 ZNF890P-202ENST00000530367 1156 ntBASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 AC132938.2-201ENST00000579188 680 ntBASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 AC084346.2-201ENST00000607097 949 ntBASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 LINC01451-201ENST00000623792 534 ntBASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 AC004840.1-201ENST00000636359 365 ntBASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 AL591163.1-201ENST00000641757 987 ntBASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 AC018470.1-201ENST00000624790 3129 ntBASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 SLC22A20-204ENST00000530038 1673 ntBASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 AL354751.1-201ENST00000412768 1863 ntBASIC15.69■□□□□ 0.1
SNIP1Q8TAD8 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNIP1Q8TAD8 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SNIP1Q8TAD8 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNIP1Q8TAD8 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
SNIP1Q8TAD8 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SNIP1Q8TAD8 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNIP1Q8TAD8 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SNIP1Q8TAD8 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNIP1Q8TAD8 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNIP1Q8TAD8 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SNIP1Q8TAD8 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SNIP1Q8TAD8 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
SNIP1Q8TAD8 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.69■□□□□ 0.1
SNIP1Q8TAD8 AC022210.1-201ENST00000449856 793 ntBASIC15.69■□□□□ 0.1
SNIP1Q8TAD8 AC135586.1-201ENST00000539323 574 ntBASIC15.69■□□□□ 0.1
SNIP1Q8TAD8 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SNIP1Q8TAD8 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SNIP1Q8TAD8 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
SNIP1Q8TAD8 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
SNIP1Q8TAD8 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNIP1Q8TAD8 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.69■□□□□ 0.1
SNIP1Q8TAD8 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNIP1Q8TAD8 TOP3BP1-201ENST00000420768 1380 ntBASIC15.69■□□□□ 0.1
SNIP1Q8TAD8 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SNIP1Q8TAD8 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SNIP1Q8TAD8 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNIP1Q8TAD8 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.69■□□□□ 0.1
SNIP1Q8TAD8 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNIP1Q8TAD8 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNIP1Q8TAD8 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNIP1Q8TAD8 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SNIP1Q8TAD8 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNIP1Q8TAD8 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNIP1Q8TAD8 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNIP1Q8TAD8 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SNIP1Q8TAD8 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNIP1Q8TAD8 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms