Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CFAP61Q8NHU2 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17■□□□□ 0.31
CFAP61Q8NHU2 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CFAP61Q8NHU2 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CFAP61Q8NHU2 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17■□□□□ 0.31
CFAP61Q8NHU2 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CFAP61Q8NHU2 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
CFAP61Q8NHU2 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17■□□□□ 0.31
CFAP61Q8NHU2 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17■□□□□ 0.31
CFAP61Q8NHU2 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
CFAP61Q8NHU2 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17■□□□□ 0.31
CFAP61Q8NHU2 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CFAP61Q8NHU2 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CFAP61Q8NHU2 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17■□□□□ 0.31
CFAP61Q8NHU2 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CFAP61Q8NHU2 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17■□□□□ 0.31
CFAP61Q8NHU2 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17■□□□□ 0.31
CFAP61Q8NHU2 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17■□□□□ 0.31
CFAP61Q8NHU2 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17■□□□□ 0.31
CFAP61Q8NHU2 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17■□□□□ 0.31
CFAP61Q8NHU2 BMF-207ENST00000559701 630 ntTSL 3 BASIC17■□□□□ 0.31
CFAP61Q8NHU2 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17■□□□□ 0.31
CFAP61Q8NHU2 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CFAP61Q8NHU2 AL691432.3-201ENST00000621860 400 ntBASIC17■□□□□ 0.31
CFAP61Q8NHU2 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17■□□□□ 0.31
CFAP61Q8NHU2 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17■□□□□ 0.31
CFAP61Q8NHU2 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17■□□□□ 0.31
CFAP61Q8NHU2 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CFAP61Q8NHU2 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17■□□□□ 0.31
CFAP61Q8NHU2 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CFAP61Q8NHU2 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17■□□□□ 0.31
CFAP61Q8NHU2 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17■□□□□ 0.31
CFAP61Q8NHU2 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CFAP61Q8NHU2 AL135999.2-201ENST00000622438 1686 ntBASIC17■□□□□ 0.31
CFAP61Q8NHU2 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CFAP61Q8NHU2 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17■□□□□ 0.31
CFAP61Q8NHU2 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CFAP61Q8NHU2 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CFAP61Q8NHU2 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CFAP61Q8NHU2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CFAP61Q8NHU2 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 AC004870.1-201ENST00000315132 882 ntBASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 FGFR3P6-201ENST00000457012 610 ntBASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 SART3-203ENST00000546611 1184 ntBASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.99■□□□□ 0.31
CFAP61Q8NHU2 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.98■□□□□ 0.31
CFAP61Q8NHU2 AC097637.2-201ENST00000624096 1997 ntBASIC16.98■□□□□ 0.31
CFAP61Q8NHU2 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP61Q8NHU2 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP61Q8NHU2 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP61Q8NHU2 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CFAP61Q8NHU2 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP61Q8NHU2 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP61Q8NHU2 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.98■□□□□ 0.31
CFAP61Q8NHU2 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP61Q8NHU2 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CFAP61Q8NHU2 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.98■□□□□ 0.31
CFAP61Q8NHU2 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP61Q8NHU2 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP61Q8NHU2 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP61Q8NHU2 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP61Q8NHU2 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP61Q8NHU2 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP61Q8NHU2 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.98■□□□□ 0.31
CFAP61Q8NHU2 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms