Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CCDC148Q8NFR7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC148Q8NFR7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC148Q8NFR7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.23■□□□□ 0.67
CCDC148Q8NFR7 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CCDC148Q8NFR7 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC148Q8NFR7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC148Q8NFR7 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC148Q8NFR7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC148Q8NFR7 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
CCDC148Q8NFR7 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC148Q8NFR7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC148Q8NFR7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC148Q8NFR7 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC148Q8NFR7 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC148Q8NFR7 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC148Q8NFR7 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC148Q8NFR7 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC148Q8NFR7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC148Q8NFR7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC148Q8NFR7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC148Q8NFR7 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC148Q8NFR7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC148Q8NFR7 PMS2P4-201ENST00000412466 1052 ntBASIC19.22■□□□□ 0.67
CCDC148Q8NFR7 AC023274.1-201ENST00000418278 595 ntBASIC19.22■□□□□ 0.67
CCDC148Q8NFR7 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC148Q8NFR7 AC140658.5-201ENST00000438532 169 ntBASIC19.22■□□□□ 0.67
CCDC148Q8NFR7 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC148Q8NFR7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC148Q8NFR7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC148Q8NFR7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC148Q8NFR7 AC109635.5-201ENST00000533593 962 ntBASIC19.22■□□□□ 0.67
CCDC148Q8NFR7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.22■□□□□ 0.67
CCDC148Q8NFR7 AC021097.1-201ENST00000607902 574 ntBASIC19.22■□□□□ 0.67
CCDC148Q8NFR7 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC148Q8NFR7 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC148Q8NFR7 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC148Q8NFR7 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC148Q8NFR7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC148Q8NFR7 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CCDC148Q8NFR7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC148Q8NFR7 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CCDC148Q8NFR7 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC148Q8NFR7 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC148Q8NFR7 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC148Q8NFR7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC148Q8NFR7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC148Q8NFR7 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC148Q8NFR7 FLJ38576-201ENST00000623820 2459 ntBASIC19.22■□□□□ 0.67
CCDC148Q8NFR7 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC148Q8NFR7 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC148Q8NFR7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC148Q8NFR7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC148Q8NFR7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC148Q8NFR7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC148Q8NFR7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC148Q8NFR7 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC148Q8NFR7 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC148Q8NFR7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC148Q8NFR7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC148Q8NFR7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.21■□□□□ 0.67
CCDC148Q8NFR7 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC148Q8NFR7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC148Q8NFR7 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC148Q8NFR7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC148Q8NFR7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC148Q8NFR7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC148Q8NFR7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC148Q8NFR7 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC148Q8NFR7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC148Q8NFR7 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC148Q8NFR7 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CCDC148Q8NFR7 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC148Q8NFR7 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC148Q8NFR7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC148Q8NFR7 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC148Q8NFR7 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC148Q8NFR7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC148Q8NFR7 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC148Q8NFR7 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC148Q8NFR7 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC148Q8NFR7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CCDC148Q8NFR7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC148Q8NFR7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC148Q8NFR7 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC148Q8NFR7 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CCDC148Q8NFR7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC148Q8NFR7 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
CCDC148Q8NFR7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC148Q8NFR7 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC148Q8NFR7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC148Q8NFR7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC148Q8NFR7 AC004832.2-201ENST00000426397 482 ntBASIC19.2■□□□□ 0.66
CCDC148Q8NFR7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC148Q8NFR7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC148Q8NFR7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CCDC148Q8NFR7 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC148Q8NFR7 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CCDC148Q8NFR7 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC148Q8NFR7 AL009183.1-201ENST00000603760 355 ntBASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms