Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 AC106820.2-201ENST00000563775 3264 ntBASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 LDHBP1-201ENST00000455730 1119 ntBASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 YBX1P6-201ENST00000442962 1002 ntBASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 AL022328.3-201ENST00000607943 679 ntBASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC168Q8NDH2 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 MBP-227ENST00000526111 581 ntTSL 4 BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 MIR4492-201ENST00000581627 80 ntBASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 CYP2A7P1-201ENST00000595391 815 ntBASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 AL118558.3-201ENST00000607414 1079 ntBASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.8□□□□□ -0.2
CCDC168Q8NDH2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC168Q8NDH2 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC168Q8NDH2 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC168Q8NDH2 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC168Q8NDH2 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CCDC168Q8NDH2 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC168Q8NDH2 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC13.79□□□□□ -0.2
CCDC168Q8NDH2 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC168Q8NDH2 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC168Q8NDH2 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCDC168Q8NDH2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CCDC168Q8NDH2 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms