Protein–RNA interactions for Protein: Q8N6N3

C1orf52, UPF0690 protein C1orf52, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf52Q8N6N3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 MRPL20P1-201ENST00000400819 433 ntBASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 AC108073.2-201ENST00000464002 357 ntBASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 AC087641.1-201ENST00000557561 1021 ntBASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 AC005412.3-201ENST00000580309 715 ntBASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 AC117500.6-201ENST00000624871 588 ntBASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 AL031731.1-201ENST00000642131 2094 ntBASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
C1orf52Q8N6N3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 AC092910.1-201ENST00000482027 1129 ntBASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 AP002469.2-201ENST00000531724 424 ntBASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 AL049840.3-201ENST00000602669 611 ntBASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 AC104692.2-201ENST00000603054 253 ntBASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 AL773604.1-201ENST00000617417 272 ntBASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 AC004790.2-201ENST00000623588 572 ntBASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
C1orf52Q8N6N3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms