Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
XRN1Q8IZH2 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
XRN1Q8IZH2 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
XRN1Q8IZH2 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC22.72■■□□□ 1.23
XRN1Q8IZH2 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC22.72■■□□□ 1.23
XRN1Q8IZH2 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC22.72■■□□□ 1.23
XRN1Q8IZH2 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
XRN1Q8IZH2 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC22.72■■□□□ 1.23
XRN1Q8IZH2 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
XRN1Q8IZH2 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
XRN1Q8IZH2 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
XRN1Q8IZH2 RNA5SP412-201ENST00000516234 123 ntBASIC22.71■■□□□ 1.23
XRN1Q8IZH2 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
XRN1Q8IZH2 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
XRN1Q8IZH2 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC22.71■■□□□ 1.23
XRN1Q8IZH2 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
XRN1Q8IZH2 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC22.71■■□□□ 1.23
XRN1Q8IZH2 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
XRN1Q8IZH2 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC22.71■■□□□ 1.23
XRN1Q8IZH2 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
XRN1Q8IZH2 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
XRN1Q8IZH2 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
XRN1Q8IZH2 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
XRN1Q8IZH2 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC22.71■■□□□ 1.23
XRN1Q8IZH2 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC22.71■■□□□ 1.23
XRN1Q8IZH2 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
XRN1Q8IZH2 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC22.71■■□□□ 1.23
XRN1Q8IZH2 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC22.71■■□□□ 1.23
XRN1Q8IZH2 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
XRN1Q8IZH2 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
XRN1Q8IZH2 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
XRN1Q8IZH2 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC22.71■■□□□ 1.23
XRN1Q8IZH2 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
XRN1Q8IZH2 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC22.71■■□□□ 1.23
XRN1Q8IZH2 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC22.71■■□□□ 1.23
XRN1Q8IZH2 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC22.71■■□□□ 1.23
XRN1Q8IZH2 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
XRN1Q8IZH2 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC22.71■■□□□ 1.23
XRN1Q8IZH2 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
XRN1Q8IZH2 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
XRN1Q8IZH2 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.23
XRN1Q8IZH2 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC22.7■■□□□ 1.23
XRN1Q8IZH2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
XRN1Q8IZH2 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
XRN1Q8IZH2 GATB-213ENST00000515812 1893 ntTSL 5 BASIC22.7■■□□□ 1.22
XRN1Q8IZH2 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
XRN1Q8IZH2 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC22.7■■□□□ 1.22
XRN1Q8IZH2 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
XRN1Q8IZH2 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC22.7■■□□□ 1.22
XRN1Q8IZH2 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC22.7■■□□□ 1.22
XRN1Q8IZH2 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC22.7■■□□□ 1.22
XRN1Q8IZH2 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
XRN1Q8IZH2 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
XRN1Q8IZH2 LBX2-201ENST00000341396 886 ntTSL 3 BASIC22.7■■□□□ 1.22
XRN1Q8IZH2 AZGP1P1-201ENST00000411909 902 ntBASIC22.7■■□□□ 1.22
XRN1Q8IZH2 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC22.7■■□□□ 1.22
XRN1Q8IZH2 CSF2RBP1-201ENST00000447905 391 ntBASIC22.7■■□□□ 1.22
XRN1Q8IZH2 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC22.7■■□□□ 1.22
XRN1Q8IZH2 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC22.7■■□□□ 1.22
XRN1Q8IZH2 MIR4321-201ENST00000592276 80 ntBASIC22.7■■□□□ 1.22
XRN1Q8IZH2 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
XRN1Q8IZH2 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
XRN1Q8IZH2 DEK-201ENST00000244776 1441 ntTSL 2 BASIC22.7■■□□□ 1.22
XRN1Q8IZH2 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
XRN1Q8IZH2 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
XRN1Q8IZH2 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
XRN1Q8IZH2 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
XRN1Q8IZH2 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
XRN1Q8IZH2 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
XRN1Q8IZH2 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
XRN1Q8IZH2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC22.69■■□□□ 1.22
XRN1Q8IZH2 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC22.69■■□□□ 1.22
XRN1Q8IZH2 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
XRN1Q8IZH2 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
XRN1Q8IZH2 APOC3-202ENST00000375345 604 ntTSL 5 BASIC22.69■■□□□ 1.22
XRN1Q8IZH2 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC22.69■■□□□ 1.22
XRN1Q8IZH2 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC22.69■■□□□ 1.22
XRN1Q8IZH2 AC068587.3-201ENST00000526613 355 ntBASIC22.69■■□□□ 1.22
XRN1Q8IZH2 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
XRN1Q8IZH2 AC244093.1-201ENST00000610837 814 ntBASIC22.69■■□□□ 1.22
XRN1Q8IZH2 AC068587.10-201ENST00000641210 219 ntBASIC22.69■■□□□ 1.22
XRN1Q8IZH2 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
XRN1Q8IZH2 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
XRN1Q8IZH2 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
XRN1Q8IZH2 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
XRN1Q8IZH2 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC22.69■■□□□ 1.22
XRN1Q8IZH2 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC22.69■■□□□ 1.22
XRN1Q8IZH2 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
XRN1Q8IZH2 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
XRN1Q8IZH2 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC22.68■■□□□ 1.22
XRN1Q8IZH2 AC005229.1-201ENST00000392885 409 ntBASIC22.68■■□□□ 1.22
XRN1Q8IZH2 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC22.68■■□□□ 1.22
XRN1Q8IZH2 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
XRN1Q8IZH2 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC22.68■■□□□ 1.22
XRN1Q8IZH2 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC22.68■■□□□ 1.22
XRN1Q8IZH2 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC22.68■■□□□ 1.22
XRN1Q8IZH2 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC22.68■■□□□ 1.22
XRN1Q8IZH2 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC22.68■■□□□ 1.22
XRN1Q8IZH2 DERL2-202ENST00000570848 657 ntTSL 5 BASIC22.68■■□□□ 1.22
XRN1Q8IZH2 PIGL-212ENST00000581006 554 ntTSL 4 BASIC22.68■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms