Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLX4Q8IY92 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLX4Q8IY92 AL390961.4-201ENST00000623958 2535 ntBASIC19.98■□□□□ 0.79
SLX4Q8IY92 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLX4Q8IY92 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC19.98■□□□□ 0.79
SLX4Q8IY92 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC19.98■□□□□ 0.79
SLX4Q8IY92 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC19.98■□□□□ 0.79
SLX4Q8IY92 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLX4Q8IY92 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC19.98■□□□□ 0.79
SLX4Q8IY92 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC19.98■□□□□ 0.79
SLX4Q8IY92 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC19.98■□□□□ 0.79
SLX4Q8IY92 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC19.98■□□□□ 0.79
SLX4Q8IY92 AC233724.13-201ENST00000598383 410 ntBASIC19.98■□□□□ 0.79
SLX4Q8IY92 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SLX4Q8IY92 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLX4Q8IY92 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
SLX4Q8IY92 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLX4Q8IY92 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLX4Q8IY92 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.98■□□□□ 0.79
SLX4Q8IY92 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
SLX4Q8IY92 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.98■□□□□ 0.79
SLX4Q8IY92 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLX4Q8IY92 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
SLX4Q8IY92 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.98■□□□□ 0.79
SLX4Q8IY92 AC134043.2-201ENST00000624206 2238 ntBASIC19.98■□□□□ 0.79
SLX4Q8IY92 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLX4Q8IY92 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLX4Q8IY92 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SLX4Q8IY92 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLX4Q8IY92 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLX4Q8IY92 AL031731.1-201ENST00000642131 2094 ntBASIC19.97■□□□□ 0.79
SLX4Q8IY92 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLX4Q8IY92 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
SLX4Q8IY92 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC19.97■□□□□ 0.79
SLX4Q8IY92 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC19.97■□□□□ 0.79
SLX4Q8IY92 ACTBP11-201ENST00000436287 1126 ntBASIC19.97■□□□□ 0.79
SLX4Q8IY92 AL139010.1-201ENST00000454878 894 ntBASIC19.97■□□□□ 0.79
SLX4Q8IY92 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
SLX4Q8IY92 AL512652.2-201ENST00000625156 1716 ntBASIC19.97■□□□□ 0.79
SLX4Q8IY92 NEFHP1-201ENST00000412845 2629 ntBASIC19.97■□□□□ 0.79
SLX4Q8IY92 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
SLX4Q8IY92 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLX4Q8IY92 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLX4Q8IY92 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLX4Q8IY92 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLX4Q8IY92 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SLX4Q8IY92 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SLX4Q8IY92 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLX4Q8IY92 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SLX4Q8IY92 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.97■□□□□ 0.79
SLX4Q8IY92 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SLX4Q8IY92 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.97■□□□□ 0.79
SLX4Q8IY92 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SLX4Q8IY92 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC19.97■□□□□ 0.79
SLX4Q8IY92 AC108725.1-201ENST00000495472 409 ntBASIC19.97■□□□□ 0.79
SLX4Q8IY92 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SLX4Q8IY92 MIR6869-201ENST00000619434 62 ntBASIC19.97■□□□□ 0.79
SLX4Q8IY92 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLX4Q8IY92 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SLX4Q8IY92 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLX4Q8IY92 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
SLX4Q8IY92 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SLX4Q8IY92 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC19.96■□□□□ 0.79
SLX4Q8IY92 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLX4Q8IY92 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.96■□□□□ 0.79
SLX4Q8IY92 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.96■□□□□ 0.79
SLX4Q8IY92 GPAA1P2-202ENST00000606848 1787 ntBASIC19.96■□□□□ 0.79
SLX4Q8IY92 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SLX4Q8IY92 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLX4Q8IY92 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.96■□□□□ 0.79
SLX4Q8IY92 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SLX4Q8IY92 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC19.96■□□□□ 0.79
SLX4Q8IY92 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC19.96■□□□□ 0.79
SLX4Q8IY92 STX1A-203ENST00000395155 783 ntTSL 2 BASIC19.96■□□□□ 0.79
SLX4Q8IY92 AC004945.1-201ENST00000416738 983 ntBASIC19.96■□□□□ 0.79
SLX4Q8IY92 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC19.96■□□□□ 0.79
SLX4Q8IY92 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC19.96■□□□□ 0.79
SLX4Q8IY92 AL139011.1-202ENST00000642063 584 ntBASIC19.96■□□□□ 0.79
SLX4Q8IY92 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLX4Q8IY92 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.96■□□□□ 0.79
SLX4Q8IY92 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLX4Q8IY92 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
SLX4Q8IY92 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLX4Q8IY92 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.96■□□□□ 0.79
SLX4Q8IY92 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC19.95■□□□□ 0.78
SLX4Q8IY92 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SLX4Q8IY92 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC19.95■□□□□ 0.78
SLX4Q8IY92 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SLX4Q8IY92 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
SLX4Q8IY92 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC19.95■□□□□ 0.78
SLX4Q8IY92 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
SLX4Q8IY92 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC19.95■□□□□ 0.78
SLX4Q8IY92 AL158212.4-201ENST00000624062 1286 ntBASIC19.95■□□□□ 0.78
SLX4Q8IY92 AC093525.8-201ENST00000624099 1342 ntBASIC19.95■□□□□ 0.78
SLX4Q8IY92 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
SLX4Q8IY92 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.95■□□□□ 0.78
SLX4Q8IY92 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC19.95■□□□□ 0.78
SLX4Q8IY92 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SLX4Q8IY92 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SLX4Q8IY92 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms