Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM48Q8IWZ4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.41■□□□□ 0.22
TRIM48Q8IWZ4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM48Q8IWZ4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TRIM48Q8IWZ4 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM48Q8IWZ4 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM48Q8IWZ4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM48Q8IWZ4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM48Q8IWZ4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM48Q8IWZ4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM48Q8IWZ4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM48Q8IWZ4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM48Q8IWZ4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TRIM48Q8IWZ4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM48Q8IWZ4 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM48Q8IWZ4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM48Q8IWZ4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM48Q8IWZ4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM48Q8IWZ4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TRIM48Q8IWZ4 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM48Q8IWZ4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM48Q8IWZ4 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.4■□□□□ 0.22
TRIM48Q8IWZ4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.4■□□□□ 0.22
TRIM48Q8IWZ4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.4■□□□□ 0.22
TRIM48Q8IWZ4 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.4■□□□□ 0.22
TRIM48Q8IWZ4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM48Q8IWZ4 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.4■□□□□ 0.22
TRIM48Q8IWZ4 AC092902.6-201ENST00000641783 218 ntBASIC16.4■□□□□ 0.22
TRIM48Q8IWZ4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.4■□□□□ 0.22
TRIM48Q8IWZ4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM48Q8IWZ4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM48Q8IWZ4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TRIM48Q8IWZ4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.4■□□□□ 0.22
TRIM48Q8IWZ4 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM48Q8IWZ4 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM48Q8IWZ4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TRIM48Q8IWZ4 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM48Q8IWZ4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM48Q8IWZ4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM48Q8IWZ4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM48Q8IWZ4 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM48Q8IWZ4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM48Q8IWZ4 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TRIM48Q8IWZ4 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 AC131009.4-201ENST00000624048 1740 ntBASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 HMGA1P7-201ENST00000406908 502 ntBASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 AC254562.1-201ENST00000417586 456 ntBASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 CNN2P11-201ENST00000429351 262 ntBASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 AC092183.1-201ENST00000469884 875 ntBASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 MPDU1-223ENST00000582151 728 ntBASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 AC092053.1-201ENST00000605787 1936 ntBASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM48Q8IWZ4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.38■□□□□ 0.21
TRIM48Q8IWZ4 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM48Q8IWZ4 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM48Q8IWZ4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.38■□□□□ 0.21
TRIM48Q8IWZ4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM48Q8IWZ4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.38■□□□□ 0.21
TRIM48Q8IWZ4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM48Q8IWZ4 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.38■□□□□ 0.21
TRIM48Q8IWZ4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM48Q8IWZ4 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM48Q8IWZ4 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms