Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC83Q8IWF9 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC83Q8IWF9 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC83Q8IWF9 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC83Q8IWF9 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC83Q8IWF9 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC83Q8IWF9 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC83Q8IWF9 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC83Q8IWF9 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC83Q8IWF9 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC83Q8IWF9 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.63■□□□□ 0.73
CCDC83Q8IWF9 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.63■□□□□ 0.73
CCDC83Q8IWF9 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC83Q8IWF9 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CCDC83Q8IWF9 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC83Q8IWF9 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC83Q8IWF9 AC091167.2-201ENST00000579581 588 ntBASIC19.63■□□□□ 0.73
CCDC83Q8IWF9 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CCDC83Q8IWF9 CYP2A7P1-201ENST00000595391 815 ntBASIC19.63■□□□□ 0.73
CCDC83Q8IWF9 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.63■□□□□ 0.73
CCDC83Q8IWF9 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC83Q8IWF9 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC83Q8IWF9 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC83Q8IWF9 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC83Q8IWF9 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC83Q8IWF9 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
CCDC83Q8IWF9 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC83Q8IWF9 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CCDC83Q8IWF9 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC83Q8IWF9 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC83Q8IWF9 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC83Q8IWF9 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC83Q8IWF9 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC83Q8IWF9 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCDC83Q8IWF9 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC83Q8IWF9 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC83Q8IWF9 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC83Q8IWF9 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
CCDC83Q8IWF9 MTHFR-217ENST00000641820 1569 ntBASIC19.62■□□□□ 0.73
CCDC83Q8IWF9 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
CCDC83Q8IWF9 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC83Q8IWF9 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
CCDC83Q8IWF9 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC83Q8IWF9 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
CCDC83Q8IWF9 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC83Q8IWF9 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC83Q8IWF9 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
CCDC83Q8IWF9 HNRNPDP1-201ENST00000439535 754 ntBASIC19.62■□□□□ 0.73
CCDC83Q8IWF9 DUSP5P1-201ENST00000441325 1139 ntBASIC19.62■□□□□ 0.73
CCDC83Q8IWF9 EMBP1-201ENST00000458200 901 ntBASIC19.62■□□□□ 0.73
CCDC83Q8IWF9 RNPS1P1-201ENST00000507437 918 ntBASIC19.62■□□□□ 0.73
CCDC83Q8IWF9 AC073648.2-201ENST00000510116 352 ntBASIC19.62■□□□□ 0.73
CCDC83Q8IWF9 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC83Q8IWF9 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC83Q8IWF9 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC83Q8IWF9 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC83Q8IWF9 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.62■□□□□ 0.73
CCDC83Q8IWF9 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC83Q8IWF9 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC83Q8IWF9 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC83Q8IWF9 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC83Q8IWF9 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC83Q8IWF9 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC83Q8IWF9 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC83Q8IWF9 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC83Q8IWF9 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCDC83Q8IWF9 AC007950.2-201ENST00000615045 2347 ntBASIC19.62■□□□□ 0.73
CCDC83Q8IWF9 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CCDC83Q8IWF9 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC83Q8IWF9 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC83Q8IWF9 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC83Q8IWF9 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC83Q8IWF9 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC83Q8IWF9 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC83Q8IWF9 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC83Q8IWF9 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC83Q8IWF9 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC83Q8IWF9 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
CCDC83Q8IWF9 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC83Q8IWF9 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CCDC83Q8IWF9 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CCDC83Q8IWF9 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC83Q8IWF9 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC83Q8IWF9 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC83Q8IWF9 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CCDC83Q8IWF9 AC136632.2-201ENST00000512891 861 ntBASIC19.61■□□□□ 0.73
CCDC83Q8IWF9 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC83Q8IWF9 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.61■□□□□ 0.73
CCDC83Q8IWF9 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.61■□□□□ 0.73
CCDC83Q8IWF9 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC83Q8IWF9 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC83Q8IWF9 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC83Q8IWF9 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC83Q8IWF9 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC83Q8IWF9 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC83Q8IWF9 PAUPAR-201ENST00000630360 2965 ntBASIC19.61■□□□□ 0.73
CCDC83Q8IWF9 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC83Q8IWF9 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC83Q8IWF9 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC83Q8IWF9 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms