Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
NUDCD3Q8IVD9 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
NUDCD3Q8IVD9 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
NUDCD3Q8IVD9 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NUDCD3Q8IVD9 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.64■□□□□ 0.25
NUDCD3Q8IVD9 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.64■□□□□ 0.25
NUDCD3Q8IVD9 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NUDCD3Q8IVD9 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NUDCD3Q8IVD9 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 AL365209.1-201ENST00000624418 6473 ntBASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 AC010491.1-201ENST00000563101 2797 ntBASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 AC063952.2-201ENST00000498792 1227 ntBASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 AC093827.2-201ENST00000512654 315 ntBASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 AP005901.3-202ENST00000581653 237 ntBASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.63■□□□□ 0.25
NUDCD3Q8IVD9 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.62■□□□□ 0.25
NUDCD3Q8IVD9 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.62■□□□□ 0.25
NUDCD3Q8IVD9 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NUDCD3Q8IVD9 INTS4P1-201ENST00000438455 1935 ntBASIC16.62■□□□□ 0.25
NUDCD3Q8IVD9 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.62■□□□□ 0.25
NUDCD3Q8IVD9 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NUDCD3Q8IVD9 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NUDCD3Q8IVD9 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.62■□□□□ 0.25
NUDCD3Q8IVD9 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NUDCD3Q8IVD9 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NUDCD3Q8IVD9 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NUDCD3Q8IVD9 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NUDCD3Q8IVD9 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NUDCD3Q8IVD9 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.62■□□□□ 0.25
NUDCD3Q8IVD9 AC092384.3-202ENST00000564646 2873 ntBASIC16.62■□□□□ 0.25
NUDCD3Q8IVD9 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
NUDCD3Q8IVD9 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NUDCD3Q8IVD9 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NUDCD3Q8IVD9 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NUDCD3Q8IVD9 LINC00982-205ENST00000420957 435 ntBASIC16.62■□□□□ 0.25
NUDCD3Q8IVD9 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.62■□□□□ 0.25
NUDCD3Q8IVD9 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.62■□□□□ 0.25
NUDCD3Q8IVD9 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NUDCD3Q8IVD9 AC004817.3-201ENST00000602957 2129 ntBASIC16.62■□□□□ 0.25
NUDCD3Q8IVD9 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NUDCD3Q8IVD9 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.62■□□□□ 0.25
NUDCD3Q8IVD9 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NUDCD3Q8IVD9 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NUDCD3Q8IVD9 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NUDCD3Q8IVD9 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.62■□□□□ 0.25
NUDCD3Q8IVD9 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms