Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB11FIP4Q86YS3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB11FIP4Q86YS3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.59■□□□□ 0.73
RAB11FIP4Q86YS3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB11FIP4Q86YS3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RAB11FIP4Q86YS3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAB11FIP4Q86YS3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
RAB11FIP4Q86YS3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RAB11FIP4Q86YS3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAB11FIP4Q86YS3 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAB11FIP4Q86YS3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.58■□□□□ 0.73
RAB11FIP4Q86YS3 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.58■□□□□ 0.73
RAB11FIP4Q86YS3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.58■□□□□ 0.73
RAB11FIP4Q86YS3 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
RAB11FIP4Q86YS3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.58■□□□□ 0.73
RAB11FIP4Q86YS3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAB11FIP4Q86YS3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAB11FIP4Q86YS3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAB11FIP4Q86YS3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.58■□□□□ 0.72
RAB11FIP4Q86YS3 PGAM5P1-201ENST00000518923 814 ntBASIC19.58■□□□□ 0.72
RAB11FIP4Q86YS3 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.58■□□□□ 0.72
RAB11FIP4Q86YS3 MIR4515-201ENST00000584082 81 ntBASIC19.58■□□□□ 0.72
RAB11FIP4Q86YS3 FAM197Y3-203ENST00000618346 717 ntBASIC19.58■□□□□ 0.72
RAB11FIP4Q86YS3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.58■□□□□ 0.72
RAB11FIP4Q86YS3 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAB11FIP4Q86YS3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAB11FIP4Q86YS3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC19.58■□□□□ 0.72
RAB11FIP4Q86YS3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.58■□□□□ 0.72
RAB11FIP4Q86YS3 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 AP002490.2-201ENST00000524791 560 ntBASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 KRT18P58-201ENST00000527480 1120 ntBASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 AC023141.13-201ENST00000604991 943 ntBASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 AL118508.1-201ENST00000613502 2345 ntBASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAB11FIP4Q86YS3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RAB11FIP4Q86YS3 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB11FIP4Q86YS3 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.56■□□□□ 0.72
RAB11FIP4Q86YS3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.56■□□□□ 0.72
RAB11FIP4Q86YS3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB11FIP4Q86YS3 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.56■□□□□ 0.72
RAB11FIP4Q86YS3 LINC02199-201ENST00000506655 2702 ntBASIC19.56■□□□□ 0.72
RAB11FIP4Q86YS3 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
RAB11FIP4Q86YS3 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB11FIP4Q86YS3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB11FIP4Q86YS3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RAB11FIP4Q86YS3 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
RAB11FIP4Q86YS3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB11FIP4Q86YS3 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB11FIP4Q86YS3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB11FIP4Q86YS3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB11FIP4Q86YS3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RAB11FIP4Q86YS3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
RAB11FIP4Q86YS3 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.56■□□□□ 0.72
RAB11FIP4Q86YS3 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.56■□□□□ 0.72
RAB11FIP4Q86YS3 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.56■□□□□ 0.72
RAB11FIP4Q86YS3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
RAB11FIP4Q86YS3 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.56■□□□□ 0.72
RAB11FIP4Q86YS3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RAB11FIP4Q86YS3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB11FIP4Q86YS3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.56■□□□□ 0.72
RAB11FIP4Q86YS3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.56■□□□□ 0.72
RAB11FIP4Q86YS3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB11FIP4Q86YS3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms