Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.92□□□□□ -0.02
LRRC28Q86X40 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.92□□□□□ -0.02
LRRC28Q86X40 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
LRRC28Q86X40 AC096633.1-201ENST00000422446 749 ntBASIC14.92□□□□□ -0.02
LRRC28Q86X40 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.92□□□□□ -0.02
LRRC28Q86X40 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.92□□□□□ -0.02
LRRC28Q86X40 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.92□□□□□ -0.02
LRRC28Q86X40 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.92□□□□□ -0.02
LRRC28Q86X40 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.92□□□□□ -0.02
LRRC28Q86X40 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.92□□□□□ -0.02
LRRC28Q86X40 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRRC28Q86X40 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.92□□□□□ -0.02
LRRC28Q86X40 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.92□□□□□ -0.02
LRRC28Q86X40 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.92□□□□□ -0.02
LRRC28Q86X40 AL121894.2-201ENST00000602977 491 ntBASIC14.92□□□□□ -0.02
LRRC28Q86X40 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
LRRC28Q86X40 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.92□□□□□ -0.02
LRRC28Q86X40 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRC28Q86X40 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRC28Q86X40 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.92□□□□□ -0.02
LRRC28Q86X40 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRC28Q86X40 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LRRC28Q86X40 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRC28Q86X40 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRC28Q86X40 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
LRRC28Q86X40 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
LRRC28Q86X40 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRC28Q86X40 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRC28Q86X40 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRC28Q86X40 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.92□□□□□ -0.02
LRRC28Q86X40 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRC28Q86X40 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRRC28Q86X40 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
LRRC28Q86X40 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.92□□□□□ -0.02
LRRC28Q86X40 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.92□□□□□ -0.02
LRRC28Q86X40 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRRC28Q86X40 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
LRRC28Q86X40 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.92□□□□□ -0.02
LRRC28Q86X40 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.92□□□□□ -0.02
LRRC28Q86X40 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.92□□□□□ -0.02
LRRC28Q86X40 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.92□□□□□ -0.02
LRRC28Q86X40 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRC28Q86X40 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRC28Q86X40 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRRC28Q86X40 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRRC28Q86X40 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.91□□□□□ -0.02
LRRC28Q86X40 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRRC28Q86X40 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRRC28Q86X40 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
LRRC28Q86X40 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRRC28Q86X40 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
LRRC28Q86X40 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
LRRC28Q86X40 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.91□□□□□ -0.02
LRRC28Q86X40 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRRC28Q86X40 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRRC28Q86X40 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRRC28Q86X40 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRRC28Q86X40 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRRC28Q86X40 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRRC28Q86X40 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.91□□□□□ -0.02
LRRC28Q86X40 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRRC28Q86X40 EMBP1-201ENST00000458200 901 ntBASIC14.91□□□□□ -0.02
LRRC28Q86X40 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.91□□□□□ -0.02
LRRC28Q86X40 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.91□□□□□ -0.02
LRRC28Q86X40 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.91□□□□□ -0.02
LRRC28Q86X40 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRRC28Q86X40 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
LRRC28Q86X40 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRRC28Q86X40 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.91□□□□□ -0.02
LRRC28Q86X40 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.91□□□□□ -0.02
LRRC28Q86X40 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRRC28Q86X40 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.91□□□□□ -0.02
LRRC28Q86X40 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
LRRC28Q86X40 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRRC28Q86X40 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRRC28Q86X40 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.91□□□□□ -0.02
LRRC28Q86X40 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRRC28Q86X40 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LRRC28Q86X40 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LRRC28Q86X40 ME2P1-201ENST00000426028 1970 ntBASIC14.91□□□□□ -0.02
LRRC28Q86X40 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRRC28Q86X40 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRRC28Q86X40 AC063926.3-201ENST00000624734 5658 ntBASIC14.9□□□□□ -0.02
LRRC28Q86X40 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRRC28Q86X40 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.9□□□□□ -0.02
LRRC28Q86X40 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRRC28Q86X40 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.9□□□□□ -0.02
LRRC28Q86X40 INTS4P1-201ENST00000438455 1935 ntBASIC14.9□□□□□ -0.02
LRRC28Q86X40 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.9□□□□□ -0.02
LRRC28Q86X40 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRRC28Q86X40 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.9□□□□□ -0.02
LRRC28Q86X40 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.9□□□□□ -0.02
LRRC28Q86X40 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.9□□□□□ -0.02
LRRC28Q86X40 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.9□□□□□ -0.02
LRRC28Q86X40 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
LRRC28Q86X40 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
LRRC28Q86X40 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRRC28Q86X40 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
LRRC28Q86X40 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRRC28Q86X40 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms