Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.16■□□□□ 0.02
SHFQ7M4L6 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHFQ7M4L6 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SHFQ7M4L6 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.16■□□□□ 0.02
SHFQ7M4L6 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SHFQ7M4L6 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.16■□□□□ 0.02
SHFQ7M4L6 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHFQ7M4L6 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
SHFQ7M4L6 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHFQ7M4L6 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHFQ7M4L6 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SHFQ7M4L6 MTHFR-217ENST00000641820 1569 ntBASIC15.15■□□□□ 0.02
SHFQ7M4L6 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHFQ7M4L6 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SHFQ7M4L6 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHFQ7M4L6 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHFQ7M4L6 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SHFQ7M4L6 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
SHFQ7M4L6 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SHFQ7M4L6 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHFQ7M4L6 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.15■□□□□ 0.02
SHFQ7M4L6 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.15■□□□□ 0.02
SHFQ7M4L6 TOB2P1-201ENST00000469761 992 ntBASIC15.15■□□□□ 0.02
SHFQ7M4L6 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.15■□□□□ 0.02
SHFQ7M4L6 TPSP2-201ENST00000561760 610 ntBASIC15.15■□□□□ 0.02
SHFQ7M4L6 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.15■□□□□ 0.02
SHFQ7M4L6 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
SHFQ7M4L6 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.15■□□□□ 0.02
SHFQ7M4L6 NSUN5P1-202ENST00000421140 1535 ntBASIC15.15■□□□□ 0.02
SHFQ7M4L6 NSUN5P2-203ENST00000457352 1529 ntBASIC15.15■□□□□ 0.02
SHFQ7M4L6 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.15■□□□□ 0.02
SHFQ7M4L6 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.15■□□□□ 0.02
SHFQ7M4L6 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SHFQ7M4L6 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHFQ7M4L6 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHFQ7M4L6 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SHFQ7M4L6 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHFQ7M4L6 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHFQ7M4L6 AC092850.2-201ENST00000623821 2697 ntBASIC15.15■□□□□ 0.02
SHFQ7M4L6 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHFQ7M4L6 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SHFQ7M4L6 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHFQ7M4L6 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.15■□□□□ 0.02
SHFQ7M4L6 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHFQ7M4L6 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SHFQ7M4L6 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.15■□□□□ 0.02
SHFQ7M4L6 AC006538.1-201ENST00000567905 1585 ntBASIC15.15■□□□□ 0.02
SHFQ7M4L6 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.15■□□□□ 0.02
SHFQ7M4L6 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SHFQ7M4L6 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHFQ7M4L6 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SHFQ7M4L6 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
SHFQ7M4L6 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SHFQ7M4L6 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHFQ7M4L6 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHFQ7M4L6 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.14■□□□□ 0.01
SHFQ7M4L6 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHFQ7M4L6 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.14■□□□□ 0.01
SHFQ7M4L6 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.14■□□□□ 0.01
SHFQ7M4L6 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SHFQ7M4L6 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHFQ7M4L6 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHFQ7M4L6 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHFQ7M4L6 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHFQ7M4L6 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHFQ7M4L6 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHFQ7M4L6 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHFQ7M4L6 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHFQ7M4L6 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SHFQ7M4L6 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHFQ7M4L6 PCED1CP-201ENST00000419887 785 ntBASIC15.14■□□□□ 0.01
SHFQ7M4L6 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.14■□□□□ 0.01
SHFQ7M4L6 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.14■□□□□ 0.01
SHFQ7M4L6 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHFQ7M4L6 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.14■□□□□ 0.01
SHFQ7M4L6 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.14■□□□□ 0.01
SHFQ7M4L6 BNIP3P18-201ENST00000593976 575 ntBASIC15.14■□□□□ 0.01
SHFQ7M4L6 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SHFQ7M4L6 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHFQ7M4L6 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHFQ7M4L6 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHFQ7M4L6 AC010491.1-201ENST00000563101 2797 ntBASIC15.14■□□□□ 0.01
SHFQ7M4L6 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHFQ7M4L6 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SHFQ7M4L6 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHFQ7M4L6 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHFQ7M4L6 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.14■□□□□ 0.01
SHFQ7M4L6 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.14■□□□□ 0.01
SHFQ7M4L6 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SHFQ7M4L6 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SHFQ7M4L6 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.14■□□□□ 0.01
SHFQ7M4L6 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHFQ7M4L6 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
SHFQ7M4L6 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.13■□□□□ 0.01
SHFQ7M4L6 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SHFQ7M4L6 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SHFQ7M4L6 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHFQ7M4L6 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SHFQ7M4L6 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.13■□□□□ 0.01
SHFQ7M4L6 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms