Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LCA10Q71F78 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
LCA10Q71F78 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC9.07□□□□□ -0.96
LCA10Q71F78 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC9.07□□□□□ -0.96
LCA10Q71F78 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC9.07□□□□□ -0.96
LCA10Q71F78 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC9.07□□□□□ -0.96
LCA10Q71F78 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC9.07□□□□□ -0.96
LCA10Q71F78 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
LCA10Q71F78 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC9.07□□□□□ -0.96
LCA10Q71F78 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC9.07□□□□□ -0.96
LCA10Q71F78 PHGDH-209ENST00000641074 1780 ntBASIC9.07□□□□□ -0.96
LCA10Q71F78 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
LCA10Q71F78 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 VAX1-201ENST00000277905 4494 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
LCA10Q71F78 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC9.07□□□□□ -0.96
LCA10Q71F78 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC9.07□□□□□ -0.96
LCA10Q71F78 AC034236.2-201ENST00000606662 1610 ntBASIC9.07□□□□□ -0.96
LCA10Q71F78 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC9.07□□□□□ -0.96
LCA10Q71F78 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC9.07□□□□□ -0.96
LCA10Q71F78 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 AC008040.2-201ENST00000461049 708 ntBASIC9.07□□□□□ -0.96
LCA10Q71F78 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC9.07□□□□□ -0.96
LCA10Q71F78 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
LCA10Q71F78 C1QBPP2-201ENST00000528754 825 ntBASIC9.07□□□□□ -0.96
LCA10Q71F78 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC9.07□□□□□ -0.96
LCA10Q71F78 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 AC006058.3-201ENST00000606217 1069 ntBASIC9.07□□□□□ -0.96
LCA10Q71F78 AC130371.2-201ENST00000619443 611 ntBASIC9.07□□□□□ -0.96
LCA10Q71F78 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
LCA10Q71F78 TBCB-214ENST00000629269 413 ntTSL 5 BASIC9.07□□□□□ -0.96
LCA10Q71F78 AC073648.6-201ENST00000641589 218 ntBASIC9.07□□□□□ -0.96
LCA10Q71F78 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
LCA10Q71F78 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
LCA10Q71F78 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
LCA10Q71F78 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC9.07□□□□□ -0.96
LCA10Q71F78 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC9.07□□□□□ -0.96
LCA10Q71F78 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
LCA10Q71F78 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
LCA10Q71F78 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
LCA10Q71F78 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC9.07□□□□□ -0.96
LCA10Q71F78 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LCA10Q71F78 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
LCA10Q71F78 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
LCA10Q71F78 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
LCA10Q71F78 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC9.06□□□□□ -0.96
LCA10Q71F78 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
LCA10Q71F78 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
LCA10Q71F78 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
LCA10Q71F78 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
LCA10Q71F78 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
LCA10Q71F78 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
LCA10Q71F78 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
LCA10Q71F78 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
LCA10Q71F78 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC9.06□□□□□ -0.96
LCA10Q71F78 AC006486.2-201ENST00000624246 2199 ntBASIC9.06□□□□□ -0.96
LCA10Q71F78 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
LCA10Q71F78 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
LCA10Q71F78 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC9.06□□□□□ -0.96
LCA10Q71F78 TBC1D3P2-202ENST00000577902 1649 ntBASIC9.06□□□□□ -0.96
LCA10Q71F78 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
LCA10Q71F78 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
LCA10Q71F78 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
LCA10Q71F78 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
LCA10Q71F78 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC9.06□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms