Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 LYSMD4-203ENST00000378904 2122 ntBASIC14.64□□□□□ -0.07
C11orf88Q6PI97 MIR662-201ENST00000384847 95 ntBASIC14.64□□□□□ -0.07
C11orf88Q6PI97 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 PVRIG2P-201ENST00000435460 978 ntBASIC14.64□□□□□ -0.07
C11orf88Q6PI97 DUSP5P1-201ENST00000441325 1139 ntBASIC14.64□□□□□ -0.07
C11orf88Q6PI97 SPDYE13P-201ENST00000445314 798 ntBASIC14.64□□□□□ -0.07
C11orf88Q6PI97 AC092597.1-201ENST00000487352 616 ntBASIC14.64□□□□□ -0.07
C11orf88Q6PI97 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 AC046185.3-201ENST00000623228 1824 ntBASIC14.64□□□□□ -0.07
C11orf88Q6PI97 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
C11orf88Q6PI97 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.63□□□□□ -0.07
C11orf88Q6PI97 LINC02012-201ENST00000608206 1725 ntBASIC14.63□□□□□ -0.07
C11orf88Q6PI97 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
C11orf88Q6PI97 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.63□□□□□ -0.07
C11orf88Q6PI97 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
C11orf88Q6PI97 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.63□□□□□ -0.07
C11orf88Q6PI97 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
C11orf88Q6PI97 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
C11orf88Q6PI97 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
C11orf88Q6PI97 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
C11orf88Q6PI97 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
C11orf88Q6PI97 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
C11orf88Q6PI97 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
C11orf88Q6PI97 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
C11orf88Q6PI97 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
C11orf88Q6PI97 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
C11orf88Q6PI97 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
C11orf88Q6PI97 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.63□□□□□ -0.07
C11orf88Q6PI97 NPAP1P7-201ENST00000613027 823 ntBASIC14.63□□□□□ -0.07
C11orf88Q6PI97 AC079602.3-201ENST00000623931 403 ntBASIC14.63□□□□□ -0.07
C11orf88Q6PI97 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
C11orf88Q6PI97 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
C11orf88Q6PI97 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
C11orf88Q6PI97 AL391807.1-203ENST00000604392 2365 ntBASIC14.63□□□□□ -0.07
C11orf88Q6PI97 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.63□□□□□ -0.07
C11orf88Q6PI97 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
C11orf88Q6PI97 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
C11orf88Q6PI97 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC14.63□□□□□ -0.07
C11orf88Q6PI97 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
C11orf88Q6PI97 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
C11orf88Q6PI97 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
C11orf88Q6PI97 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
C11orf88Q6PI97 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
C11orf88Q6PI97 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
C11orf88Q6PI97 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
C11orf88Q6PI97 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
C11orf88Q6PI97 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.63□□□□□ -0.07
C11orf88Q6PI97 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
C11orf88Q6PI97 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
C11orf88Q6PI97 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC14.63□□□□□ -0.07
C11orf88Q6PI97 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.63□□□□□ -0.07
C11orf88Q6PI97 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.63□□□□□ -0.07
C11orf88Q6PI97 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
C11orf88Q6PI97 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
C11orf88Q6PI97 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
C11orf88Q6PI97 AC092364.2-201ENST00000596710 2692 ntBASIC14.62□□□□□ -0.07
C11orf88Q6PI97 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
C11orf88Q6PI97 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.62□□□□□ -0.07
C11orf88Q6PI97 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
C11orf88Q6PI97 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
C11orf88Q6PI97 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
C11orf88Q6PI97 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
C11orf88Q6PI97 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
C11orf88Q6PI97 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
C11orf88Q6PI97 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
C11orf88Q6PI97 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
C11orf88Q6PI97 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
C11orf88Q6PI97 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
C11orf88Q6PI97 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms