Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC62Q6P9F0 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC62Q6P9F0 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CCDC62Q6P9F0 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC62Q6P9F0 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC62Q6P9F0 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC62Q6P9F0 AC092068.3-201ENST00000587894 2016 ntBASIC18.71■□□□□ 0.59
CCDC62Q6P9F0 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CCDC62Q6P9F0 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC62Q6P9F0 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC62Q6P9F0 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CCDC62Q6P9F0 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CCDC62Q6P9F0 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC62Q6P9F0 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC62Q6P9F0 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC62Q6P9F0 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC62Q6P9F0 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC62Q6P9F0 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC62Q6P9F0 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC62Q6P9F0 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC62Q6P9F0 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC62Q6P9F0 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CCDC62Q6P9F0 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC62Q6P9F0 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC62Q6P9F0 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC62Q6P9F0 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC62Q6P9F0 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.7■□□□□ 0.58
CCDC62Q6P9F0 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.7■□□□□ 0.58
CCDC62Q6P9F0 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CCDC62Q6P9F0 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.7■□□□□ 0.58
CCDC62Q6P9F0 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.7■□□□□ 0.58
CCDC62Q6P9F0 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.7■□□□□ 0.58
CCDC62Q6P9F0 RN7SL204P-201ENST00000582831 262 ntBASIC18.7■□□□□ 0.58
CCDC62Q6P9F0 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CCDC62Q6P9F0 AC018529.1-201ENST00000613063 361 ntBASIC18.7■□□□□ 0.58
CCDC62Q6P9F0 AL390754.1-201ENST00000619088 582 ntBASIC18.7■□□□□ 0.58
CCDC62Q6P9F0 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CCDC62Q6P9F0 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.7■□□□□ 0.58
CCDC62Q6P9F0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CCDC62Q6P9F0 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC62Q6P9F0 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC62Q6P9F0 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC62Q6P9F0 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC62Q6P9F0 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CCDC62Q6P9F0 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC62Q6P9F0 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC62Q6P9F0 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC62Q6P9F0 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CCDC62Q6P9F0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CCDC62Q6P9F0 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC62Q6P9F0 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC62Q6P9F0 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC62Q6P9F0 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.69■□□□□ 0.58
CCDC62Q6P9F0 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.69■□□□□ 0.58
CCDC62Q6P9F0 AC002472.2-201ENST00000442739 958 ntBASIC18.69■□□□□ 0.58
CCDC62Q6P9F0 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC62Q6P9F0 TSPY16P-201ENST00000449843 468 ntBASIC18.69■□□□□ 0.58
CCDC62Q6P9F0 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC62Q6P9F0 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.69■□□□□ 0.58
CCDC62Q6P9F0 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.69■□□□□ 0.58
CCDC62Q6P9F0 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC62Q6P9F0 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.69■□□□□ 0.58
CCDC62Q6P9F0 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.69■□□□□ 0.58
CCDC62Q6P9F0 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC62Q6P9F0 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC62Q6P9F0 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC62Q6P9F0 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CCDC62Q6P9F0 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC62Q6P9F0 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC62Q6P9F0 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC62Q6P9F0 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC62Q6P9F0 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC62Q6P9F0 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC62Q6P9F0 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC62Q6P9F0 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.68■□□□□ 0.58
CCDC62Q6P9F0 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC62Q6P9F0 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC62Q6P9F0 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC62Q6P9F0 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC62Q6P9F0 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CCDC62Q6P9F0 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC62Q6P9F0 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC62Q6P9F0 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
CCDC62Q6P9F0 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
CCDC62Q6P9F0 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC62Q6P9F0 AC236430.1-201ENST00000402231 743 ntBASIC18.68■□□□□ 0.58
CCDC62Q6P9F0 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC62Q6P9F0 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC62Q6P9F0 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC62Q6P9F0 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.68■□□□□ 0.58
CCDC62Q6P9F0 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC62Q6P9F0 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC62Q6P9F0 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC62Q6P9F0 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC62Q6P9F0 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC62Q6P9F0 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC62Q6P9F0 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC62Q6P9F0 PCDHB17P-201ENST00000539533 2393 ntBASIC18.68■□□□□ 0.58
CCDC62Q6P9F0 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC62Q6P9F0 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms