Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC38Q5VT99 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.31■□□□□ 0.36
LRRC38Q5VT99 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
LRRC38Q5VT99 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.31■□□□□ 0.36
LRRC38Q5VT99 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC38Q5VT99 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.31■□□□□ 0.36
LRRC38Q5VT99 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
LRRC38Q5VT99 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC38Q5VT99 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC38Q5VT99 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC38Q5VT99 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC38Q5VT99 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC38Q5VT99 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC38Q5VT99 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
LRRC38Q5VT99 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.3■□□□□ 0.36
LRRC38Q5VT99 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC38Q5VT99 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC38Q5VT99 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC38Q5VT99 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC38Q5VT99 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC38Q5VT99 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC38Q5VT99 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC38Q5VT99 AC004870.1-201ENST00000315132 882 ntBASIC17.3■□□□□ 0.36
LRRC38Q5VT99 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.3■□□□□ 0.36
LRRC38Q5VT99 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.3■□□□□ 0.36
LRRC38Q5VT99 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC38Q5VT99 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.3■□□□□ 0.36
LRRC38Q5VT99 CXCL1P1-201ENST00000502804 216 ntBASIC17.3■□□□□ 0.36
LRRC38Q5VT99 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC38Q5VT99 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
LRRC38Q5VT99 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC38Q5VT99 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LRRC38Q5VT99 AC104692.2-201ENST00000603054 253 ntBASIC17.3■□□□□ 0.36
LRRC38Q5VT99 AL773604.1-201ENST00000617417 272 ntBASIC17.3■□□□□ 0.36
LRRC38Q5VT99 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC38Q5VT99 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LRRC38Q5VT99 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC38Q5VT99 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LRRC38Q5VT99 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
LRRC38Q5VT99 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.3■□□□□ 0.36
LRRC38Q5VT99 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC38Q5VT99 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.3■□□□□ 0.36
LRRC38Q5VT99 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
LRRC38Q5VT99 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC38Q5VT99 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC38Q5VT99 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC38Q5VT99 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC38Q5VT99 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.3■□□□□ 0.36
LRRC38Q5VT99 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC38Q5VT99 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 AP002469.2-201ENST00000531724 424 ntBASIC17.29■□□□□ 0.36
LRRC38Q5VT99 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 AC021097.1-201ENST00000607902 574 ntBASIC17.29■□□□□ 0.36
LRRC38Q5VT99 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 AL645728.2-201ENST00000641974 660 ntBASIC17.29■□□□□ 0.36
LRRC38Q5VT99 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC38Q5VT99 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC38Q5VT99 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC38Q5VT99 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC38Q5VT99 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.28■□□□□ 0.36
LRRC38Q5VT99 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC38Q5VT99 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC38Q5VT99 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms