Protein–RNA interactions for Protein: Q5VT98

PRAMEF20, PRAME family member 20, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF20Q5VT98 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEF20Q5VT98 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEF20Q5VT98 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEF20Q5VT98 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
PRAMEF20Q5VT98 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEF20Q5VT98 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEF20Q5VT98 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEF20Q5VT98 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
PRAMEF20Q5VT98 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEF20Q5VT98 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEF20Q5VT98 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEF20Q5VT98 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.27■□□□□ 0.04
PRAMEF20Q5VT98 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
PRAMEF20Q5VT98 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
PRAMEF20Q5VT98 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEF20Q5VT98 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.27■□□□□ 0.04
PRAMEF20Q5VT98 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PRAMEF20Q5VT98 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEF20Q5VT98 AC004461.1-201ENST00000412461 403 ntBASIC15.27■□□□□ 0.04
PRAMEF20Q5VT98 PMS2P4-201ENST00000412466 1052 ntBASIC15.27■□□□□ 0.04
PRAMEF20Q5VT98 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEF20Q5VT98 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.27■□□□□ 0.04
PRAMEF20Q5VT98 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.27■□□□□ 0.04
PRAMEF20Q5VT98 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEF20Q5VT98 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.27■□□□□ 0.04
PRAMEF20Q5VT98 AP000344.2-201ENST00000512987 629 ntBASIC15.27■□□□□ 0.04
PRAMEF20Q5VT98 KRT8P48-201ENST00000515599 1220 ntBASIC15.27■□□□□ 0.04
PRAMEF20Q5VT98 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.27■□□□□ 0.04
PRAMEF20Q5VT98 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.27■□□□□ 0.04
PRAMEF20Q5VT98 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.27■□□□□ 0.04
PRAMEF20Q5VT98 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.27■□□□□ 0.04
PRAMEF20Q5VT98 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.27■□□□□ 0.04
PRAMEF20Q5VT98 AC013467.2-201ENST00000605472 835 ntBASIC15.27■□□□□ 0.04
PRAMEF20Q5VT98 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.27■□□□□ 0.04
PRAMEF20Q5VT98 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.27■□□□□ 0.03
PRAMEF20Q5VT98 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
PRAMEF20Q5VT98 AC016027.1-202ENST00000607927 1699 ntBASIC15.27■□□□□ 0.03
PRAMEF20Q5VT98 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.27■□□□□ 0.03
PRAMEF20Q5VT98 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
PRAMEF20Q5VT98 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.27■□□□□ 0.03
PRAMEF20Q5VT98 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRAMEF20Q5VT98 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
PRAMEF20Q5VT98 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRAMEF20Q5VT98 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRAMEF20Q5VT98 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.27■□□□□ 0.03
PRAMEF20Q5VT98 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.27■□□□□ 0.03
PRAMEF20Q5VT98 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRAMEF20Q5VT98 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PRAMEF20Q5VT98 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PRAMEF20Q5VT98 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
PRAMEF20Q5VT98 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
PRAMEF20Q5VT98 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 RNF216P1-203ENST00000404404 2427 ntBASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 AC092474.2-201ENST00000424288 719 ntBASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 AP002490.2-201ENST00000524791 560 ntBASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 FAM86C2P-203ENST00000528684 1004 ntBASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 AL513210.1-201ENST00000629608 234 ntBASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF20Q5VT98 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms