Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC26.74■■□□□ 1.87
SNAPC4Q5SXM2 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC26.74■■□□□ 1.87
SNAPC4Q5SXM2 AC106872.11-201ENST00000605838 421 ntBASIC26.74■■□□□ 1.87
SNAPC4Q5SXM2 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SNAPC4Q5SXM2 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
SNAPC4Q5SXM2 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SNAPC4Q5SXM2 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC26.74■■□□□ 1.87
SNAPC4Q5SXM2 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SNAPC4Q5SXM2 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC26.74■■□□□ 1.87
SNAPC4Q5SXM2 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC26.74■■□□□ 1.87
SNAPC4Q5SXM2 YBX1P6-201ENST00000442962 1002 ntBASIC26.74■■□□□ 1.87
SNAPC4Q5SXM2 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC26.74■■□□□ 1.87
SNAPC4Q5SXM2 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC26.74■■□□□ 1.87
SNAPC4Q5SXM2 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC26.74■■□□□ 1.87
SNAPC4Q5SXM2 TIMM17BP1-201ENST00000545713 516 ntBASIC26.74■■□□□ 1.87
SNAPC4Q5SXM2 KRT90P-201ENST00000549264 1064 ntBASIC26.74■■□□□ 1.87
SNAPC4Q5SXM2 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC26.74■■□□□ 1.87
SNAPC4Q5SXM2 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
SNAPC4Q5SXM2 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SNAPC4Q5SXM2 TPR-209ENST00000613151 2478 ntTSL 5 BASIC26.74■■□□□ 1.87
SNAPC4Q5SXM2 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SNAPC4Q5SXM2 TUBB8P12-201ENST00000308911 1335 ntBASIC26.73■■□□□ 1.87
SNAPC4Q5SXM2 TUBB7P-202ENST00000428444 1305 ntBASIC26.73■■□□□ 1.87
SNAPC4Q5SXM2 TUBB8P7-204ENST00000567960 1332 ntBASIC26.73■■□□□ 1.87
SNAPC4Q5SXM2 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
SNAPC4Q5SXM2 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SNAPC4Q5SXM2 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
SNAPC4Q5SXM2 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
SNAPC4Q5SXM2 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SNAPC4Q5SXM2 Z97205.2-201ENST00000564697 1639 ntBASIC26.73■■□□□ 1.87
SNAPC4Q5SXM2 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SNAPC4Q5SXM2 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
SNAPC4Q5SXM2 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SNAPC4Q5SXM2 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
SNAPC4Q5SXM2 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
SNAPC4Q5SXM2 MGST3-203ENST00000367885 680 ntTSL 2 BASIC26.73■■□□□ 1.87
SNAPC4Q5SXM2 APOA1-205ENST00000375329 927 ntTSL 2 BASIC26.73■■□□□ 1.87
SNAPC4Q5SXM2 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
SNAPC4Q5SXM2 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
SNAPC4Q5SXM2 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC26.73■■□□□ 1.87
SNAPC4Q5SXM2 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC26.73■■□□□ 1.87
SNAPC4Q5SXM2 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC26.73■■□□□ 1.87
SNAPC4Q5SXM2 ABBA01031663.1-201ENST00000635630 790 ntBASIC26.73■■□□□ 1.87
SNAPC4Q5SXM2 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
SNAPC4Q5SXM2 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC26.72■■□□□ 1.87
SNAPC4Q5SXM2 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC26.72■■□□□ 1.87
SNAPC4Q5SXM2 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SNAPC4Q5SXM2 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC26.72■■□□□ 1.87
SNAPC4Q5SXM2 AC008764.6-201ENST00000595909 2069 ntBASIC26.72■■□□□ 1.87
SNAPC4Q5SXM2 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SNAPC4Q5SXM2 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
SNAPC4Q5SXM2 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC26.72■■□□□ 1.87
SNAPC4Q5SXM2 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SNAPC4Q5SXM2 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC26.72■■□□□ 1.87
SNAPC4Q5SXM2 KRT8P13-201ENST00000463294 1010 ntBASIC26.72■■□□□ 1.87
SNAPC4Q5SXM2 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SNAPC4Q5SXM2 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC26.72■■□□□ 1.87
SNAPC4Q5SXM2 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC26.72■■□□□ 1.87
SNAPC4Q5SXM2 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
SNAPC4Q5SXM2 AC010328.2-201ENST00000597698 1111 ntBASIC26.72■■□□□ 1.87
SNAPC4Q5SXM2 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SNAPC4Q5SXM2 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SNAPC4Q5SXM2 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SNAPC4Q5SXM2 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SNAPC4Q5SXM2 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SNAPC4Q5SXM2 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SNAPC4Q5SXM2 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
SNAPC4Q5SXM2 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SNAPC4Q5SXM2 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC26.71■■□□□ 1.87
SNAPC4Q5SXM2 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC26.71■■□□□ 1.87
SNAPC4Q5SXM2 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
SNAPC4Q5SXM2 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
SNAPC4Q5SXM2 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SNAPC4Q5SXM2 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
SNAPC4Q5SXM2 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SNAPC4Q5SXM2 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC26.71■■□□□ 1.87
SNAPC4Q5SXM2 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC26.71■■□□□ 1.87
SNAPC4Q5SXM2 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
SNAPC4Q5SXM2 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC26.71■■□□□ 1.87
SNAPC4Q5SXM2 AC124947.2-201ENST00000547118 1133 ntBASIC26.71■■□□□ 1.87
SNAPC4Q5SXM2 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC26.71■■□□□ 1.87
SNAPC4Q5SXM2 AL359711.2-201ENST00000563105 872 ntBASIC26.71■■□□□ 1.87
SNAPC4Q5SXM2 DUX4L45-201ENST00000566406 1057 ntBASIC26.71■■□□□ 1.87
SNAPC4Q5SXM2 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC26.71■■□□□ 1.87
SNAPC4Q5SXM2 AC133539.2-201ENST00000604757 467 ntBASIC26.71■■□□□ 1.87
SNAPC4Q5SXM2 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC26.71■■□□□ 1.87
SNAPC4Q5SXM2 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SNAPC4Q5SXM2 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
SNAPC4Q5SXM2 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC26.71■■□□□ 1.87
SNAPC4Q5SXM2 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
SNAPC4Q5SXM2 CYP4F24P-201ENST00000586049 1580 ntBASIC26.7■■□□□ 1.87
SNAPC4Q5SXM2 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC26.7■■□□□ 1.87
SNAPC4Q5SXM2 CALR4P-201ENST00000431943 946 ntBASIC26.7■■□□□ 1.87
SNAPC4Q5SXM2 AC106760.1-201ENST00000508690 800 ntBASIC26.7■■□□□ 1.87
SNAPC4Q5SXM2 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC26.7■■□□□ 1.87
SNAPC4Q5SXM2 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC26.7■■□□□ 1.87
SNAPC4Q5SXM2 RN7SL560P-201ENST00000577943 264 ntBASIC26.7■■□□□ 1.87
SNAPC4Q5SXM2 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
SNAPC4Q5SXM2 AC244669.2-201ENST00000612320 853 ntBASIC26.7■■□□□ 1.87
SNAPC4Q5SXM2 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms