Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDS5AQ29RF7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDS5AQ29RF7 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDS5AQ29RF7 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PDS5AQ29RF7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.84■□□□□ 0.77
PDS5AQ29RF7 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDS5AQ29RF7 LINC01144-201ENST00000626198 1710 ntBASIC19.84■□□□□ 0.77
PDS5AQ29RF7 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PDS5AQ29RF7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDS5AQ29RF7 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDS5AQ29RF7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.83■□□□□ 0.77
PDS5AQ29RF7 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
PDS5AQ29RF7 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PDS5AQ29RF7 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDS5AQ29RF7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
PDS5AQ29RF7 HLA-A-202ENST00000376806 1854 ntBASIC19.83■□□□□ 0.77
PDS5AQ29RF7 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDS5AQ29RF7 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
PDS5AQ29RF7 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDS5AQ29RF7 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDS5AQ29RF7 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
PDS5AQ29RF7 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDS5AQ29RF7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.83■□□□□ 0.77
PDS5AQ29RF7 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.83■□□□□ 0.77
PDS5AQ29RF7 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.83■□□□□ 0.77
PDS5AQ29RF7 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.83■□□□□ 0.77
PDS5AQ29RF7 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.83■□□□□ 0.77
PDS5AQ29RF7 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PDS5AQ29RF7 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.83■□□□□ 0.77
PDS5AQ29RF7 RN7SL828P-201ENST00000607615 303 ntBASIC19.83■□□□□ 0.77
PDS5AQ29RF7 AL590560.3-201ENST00000623350 461 ntBASIC19.83■□□□□ 0.77
PDS5AQ29RF7 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PDS5AQ29RF7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDS5AQ29RF7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDS5AQ29RF7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
PDS5AQ29RF7 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDS5AQ29RF7 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDS5AQ29RF7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDS5AQ29RF7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
PDS5AQ29RF7 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC19.83■□□□□ 0.76
PDS5AQ29RF7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDS5AQ29RF7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.83■□□□□ 0.76
PDS5AQ29RF7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.83■□□□□ 0.76
PDS5AQ29RF7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDS5AQ29RF7 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC19.83■□□□□ 0.76
PDS5AQ29RF7 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PDS5AQ29RF7 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDS5AQ29RF7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PDS5AQ29RF7 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PDS5AQ29RF7 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDS5AQ29RF7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
PDS5AQ29RF7 UGT1A2P-201ENST00000454886 866 ntBASIC19.82■□□□□ 0.76
PDS5AQ29RF7 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.82■□□□□ 0.76
PDS5AQ29RF7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDS5AQ29RF7 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PDS5AQ29RF7 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.82■□□□□ 0.76
PDS5AQ29RF7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PDS5AQ29RF7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDS5AQ29RF7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
PDS5AQ29RF7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDS5AQ29RF7 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC19.82■□□□□ 0.76
PDS5AQ29RF7 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDS5AQ29RF7 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.82■□□□□ 0.76
PDS5AQ29RF7 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDS5AQ29RF7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.82■□□□□ 0.76
PDS5AQ29RF7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDS5AQ29RF7 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDS5AQ29RF7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PDS5AQ29RF7 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDS5AQ29RF7 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.81■□□□□ 0.76
PDS5AQ29RF7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDS5AQ29RF7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDS5AQ29RF7 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.81■□□□□ 0.76
PDS5AQ29RF7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PDS5AQ29RF7 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDS5AQ29RF7 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PDS5AQ29RF7 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PDS5AQ29RF7 MIR661-201ENST00000384842 89 ntBASIC19.81■□□□□ 0.76
PDS5AQ29RF7 MRPS18AP1-201ENST00000414458 589 ntBASIC19.81■□□□□ 0.76
PDS5AQ29RF7 AL080243.2-201ENST00000418783 582 ntBASIC19.81■□□□□ 0.76
PDS5AQ29RF7 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PDS5AQ29RF7 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.81■□□□□ 0.76
PDS5AQ29RF7 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.81■□□□□ 0.76
PDS5AQ29RF7 AC027369.6-201ENST00000525520 931 ntBASIC19.81■□□□□ 0.76
PDS5AQ29RF7 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.81■□□□□ 0.76
PDS5AQ29RF7 TEX28P1-201ENST00000613479 1221 ntBASIC19.81■□□□□ 0.76
PDS5AQ29RF7 TEX28P2-201ENST00000617764 1221 ntBASIC19.81■□□□□ 0.76
PDS5AQ29RF7 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.81■□□□□ 0.76
PDS5AQ29RF7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDS5AQ29RF7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PDS5AQ29RF7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PDS5AQ29RF7 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.81■□□□□ 0.76
PDS5AQ29RF7 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PDS5AQ29RF7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.81■□□□□ 0.76
PDS5AQ29RF7 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PDS5AQ29RF7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PDS5AQ29RF7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDS5AQ29RF7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
PDS5AQ29RF7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PDS5AQ29RF7 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms