Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 AC099336.1-202ENST00000602961 463 ntBASIC12.86□□□□□ -0.35
HIST1H1AQ02539 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 AL358472.4-201ENST00000633140 710 ntBASIC12.86□□□□□ -0.35
HIST1H1AQ02539 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 STX3-203ENST00000529177 1571 ntTSL 2 BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
HIST1H1AQ02539 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 AL020989.1-201ENST00000422979 469 ntBASIC12.85□□□□□ -0.35
HIST1H1AQ02539 IGHV3-47-201ENST00000425060 335 ntBASIC12.85□□□□□ -0.35
HIST1H1AQ02539 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 AC092119.3-201ENST00000612618 583 ntBASIC12.85□□□□□ -0.35
HIST1H1AQ02539 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 AC093458.2-201ENST00000623150 629 ntBASIC12.85□□□□□ -0.35
HIST1H1AQ02539 WT1-209ENST00000530998 2421 ntTSL 2 BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 AC078925.2-201ENST00000624013 1973 ntBASIC12.85□□□□□ -0.35
HIST1H1AQ02539 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 AC024909.3-201ENST00000611513 2257 ntBASIC12.85□□□□□ -0.35
HIST1H1AQ02539 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HIST1H1AQ02539 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
HIST1H1AQ02539 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms