Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEP78395 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.88■□□□□ 0.29
PRAMEP78395 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEP78395 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEP78395 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEP78395 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.88■□□□□ 0.29
PRAMEP78395 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.88■□□□□ 0.29
PRAMEP78395 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.88■□□□□ 0.29
PRAMEP78395 SLC25A6P2-201ENST00000497974 877 ntBASIC16.88■□□□□ 0.29
PRAMEP78395 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.88■□□□□ 0.29
PRAMEP78395 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.88■□□□□ 0.29
PRAMEP78395 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.88■□□□□ 0.29
PRAMEP78395 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PRAMEP78395 AC008667.4-201ENST00000607370 168 ntBASIC16.88■□□□□ 0.29
PRAMEP78395 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEP78395 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.88■□□□□ 0.29
PRAMEP78395 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEP78395 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
PRAMEP78395 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEP78395 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
PRAMEP78395 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.88■□□□□ 0.29
PRAMEP78395 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEP78395 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEP78395 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.88■□□□□ 0.29
PRAMEP78395 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEP78395 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEP78395 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.87■□□□□ 0.29
PRAMEP78395 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEP78395 AP002414.3-201ENST00000589352 1468 ntBASIC16.87■□□□□ 0.29
PRAMEP78395 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEP78395 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEP78395 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.87■□□□□ 0.29
PRAMEP78395 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEP78395 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEP78395 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PRAMEP78395 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PRAMEP78395 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PRAMEP78395 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEP78395 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEP78395 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEP78395 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEP78395 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEP78395 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.87■□□□□ 0.29
PRAMEP78395 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PRAMEP78395 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.87■□□□□ 0.29
PRAMEP78395 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEP78395 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.87■□□□□ 0.29
PRAMEP78395 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.87■□□□□ 0.29
PRAMEP78395 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PRAMEP78395 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.87■□□□□ 0.29
PRAMEP78395 HLA-J-202ENST00000469281 1241 ntBASIC16.87■□□□□ 0.29
PRAMEP78395 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEP78395 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.87■□□□□ 0.29
PRAMEP78395 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.87■□□□□ 0.29
PRAMEP78395 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.87■□□□□ 0.29
PRAMEP78395 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.87■□□□□ 0.29
PRAMEP78395 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.87■□□□□ 0.29
PRAMEP78395 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.87■□□□□ 0.29
PRAMEP78395 AL773604.1-201ENST00000617417 272 ntBASIC16.87■□□□□ 0.29
PRAMEP78395 REXO1L3P-201ENST00000622202 1288 ntBASIC16.87■□□□□ 0.29
PRAMEP78395 AC148477.8-201ENST00000624298 468 ntBASIC16.87■□□□□ 0.29
PRAMEP78395 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEP78395 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PRAMEP78395 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEP78395 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PRAMEP78395 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.87■□□□□ 0.29
PRAMEP78395 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PRAMEP78395 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEP78395 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEP78395 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PRAMEP78395 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PRAMEP78395 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
PRAMEP78395 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEP78395 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEP78395 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.86■□□□□ 0.29
PRAMEP78395 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEP78395 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
PRAMEP78395 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEP78395 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEP78395 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEP78395 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEP78395 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
PRAMEP78395 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEP78395 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEP78395 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.86■□□□□ 0.29
PRAMEP78395 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.86■□□□□ 0.29
PRAMEP78395 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.86■□□□□ 0.29
PRAMEP78395 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.86■□□□□ 0.29
PRAMEP78395 IGHV3-65-201ENST00000523210 341 ntBASIC16.86■□□□□ 0.29
PRAMEP78395 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEP78395 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.86■□□□□ 0.29
PRAMEP78395 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.86■□□□□ 0.29
PRAMEP78395 AC012640.2-201ENST00000561606 901 ntBASIC16.86■□□□□ 0.29
PRAMEP78395 MPDU1-223ENST00000582151 728 ntBASIC16.86■□□□□ 0.29
PRAMEP78395 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEP78395 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.86■□□□□ 0.29
PRAMEP78395 FAM215A-202ENST00000632077 792 ntBASIC16.86■□□□□ 0.29
PRAMEP78395 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
PRAMEP78395 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEP78395 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms