Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP1P78357 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.63■□□□□ 0.73
CNTNAP1P78357 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.63■□□□□ 0.73
CNTNAP1P78357 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP1P78357 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP1P78357 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CNTNAP1P78357 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP1P78357 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP1P78357 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP1P78357 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.63■□□□□ 0.73
CNTNAP1P78357 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP1P78357 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP1P78357 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.63■□□□□ 0.73
CNTNAP1P78357 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP1P78357 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP1P78357 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CNTNAP1P78357 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CNTNAP1P78357 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNTNAP1P78357 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNTNAP1P78357 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNTNAP1P78357 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC19.62■□□□□ 0.73
CNTNAP1P78357 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC19.62■□□□□ 0.73
CNTNAP1P78357 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNTNAP1P78357 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
CNTNAP1P78357 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNTNAP1P78357 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNTNAP1P78357 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CNTNAP1P78357 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNTNAP1P78357 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.62■□□□□ 0.73
CNTNAP1P78357 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNTNAP1P78357 AC105021.1-202ENST00000570572 669 ntBASIC19.62■□□□□ 0.73
CNTNAP1P78357 MIR3615-201ENST00000581999 87 ntBASIC19.62■□□□□ 0.73
CNTNAP1P78357 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.62■□□□□ 0.73
CNTNAP1P78357 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNTNAP1P78357 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CNTNAP1P78357 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNTNAP1P78357 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CNTNAP1P78357 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNTNAP1P78357 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.62■□□□□ 0.73
CNTNAP1P78357 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNTNAP1P78357 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.62■□□□□ 0.73
CNTNAP1P78357 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CNTNAP1P78357 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CNTNAP1P78357 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNTNAP1P78357 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNTNAP1P78357 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC19.61■□□□□ 0.73
CNTNAP1P78357 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CNTNAP1P78357 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNTNAP1P78357 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CNTNAP1P78357 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.61■□□□□ 0.73
CNTNAP1P78357 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CNTNAP1P78357 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CNTNAP1P78357 KRT43P-201ENST00000434019 910 ntBASIC19.61■□□□□ 0.73
CNTNAP1P78357 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.61■□□□□ 0.73
CNTNAP1P78357 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC19.61■□□□□ 0.73
CNTNAP1P78357 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC19.61■□□□□ 0.73
CNTNAP1P78357 AC098859.1-201ENST00000502915 1238 ntBASIC19.61■□□□□ 0.73
CNTNAP1P78357 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC19.61■□□□□ 0.73
CNTNAP1P78357 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC19.61■□□□□ 0.73
CNTNAP1P78357 AC123567.1-201ENST00000548294 1261 ntBASIC19.61■□□□□ 0.73
CNTNAP1P78357 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.61■□□□□ 0.73
CNTNAP1P78357 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNTNAP1P78357 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNTNAP1P78357 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CNTNAP1P78357 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNTNAP1P78357 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNTNAP1P78357 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC19.61■□□□□ 0.73
CNTNAP1P78357 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNTNAP1P78357 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CNTNAP1P78357 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNTNAP1P78357 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC19.61■□□□□ 0.73
CNTNAP1P78357 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.61■□□□□ 0.73
CNTNAP1P78357 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.61■□□□□ 0.73
CNTNAP1P78357 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
CNTNAP1P78357 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.61■□□□□ 0.73
CNTNAP1P78357 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNTNAP1P78357 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CNTNAP1P78357 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNTNAP1P78357 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CNTNAP1P78357 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNTNAP1P78357 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CNTNAP1P78357 RN7SL618P-201ENST00000477850 296 ntBASIC19.6■□□□□ 0.73
CNTNAP1P78357 FOS-206ENST00000555347 1280 ntTSL 2 BASIC19.6■□□□□ 0.73
CNTNAP1P78357 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNTNAP1P78357 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNTNAP1P78357 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CNTNAP1P78357 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CNTNAP1P78357 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNTNAP1P78357 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNTNAP1P78357 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNTNAP1P78357 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CNTNAP1P78357 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNTNAP1P78357 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNTNAP1P78357 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
CNTNAP1P78357 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.6■□□□□ 0.73
CNTNAP1P78357 AC093525.8-201ENST00000624099 1342 ntBASIC19.59■□□□□ 0.73
CNTNAP1P78357 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19.59■□□□□ 0.73
CNTNAP1P78357 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNTNAP1P78357 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNTNAP1P78357 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms