Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.7□□□□□ -0.06
SEC61A1P61619 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SEC61A1P61619 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SEC61A1P61619 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SEC61A1P61619 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SEC61A1P61619 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SEC61A1P61619 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SEC61A1P61619 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SEC61A1P61619 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SEC61A1P61619 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SEC61A1P61619 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SEC61A1P61619 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SEC61A1P61619 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.69□□□□□ -0.06
SEC61A1P61619 AL662844.4-201ENST00000606367 2838 ntBASIC14.69□□□□□ -0.06
SEC61A1P61619 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.69□□□□□ -0.06
SEC61A1P61619 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SEC61A1P61619 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SEC61A1P61619 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.69□□□□□ -0.06
SEC61A1P61619 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.69□□□□□ -0.06
SEC61A1P61619 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SEC61A1P61619 AC005104.2-201ENST00000427818 678 ntBASIC14.69□□□□□ -0.06
SEC61A1P61619 KRT18P67-201ENST00000432816 1264 ntBASIC14.69□□□□□ -0.06
SEC61A1P61619 AL662844.1-201ENST00000546340 181 ntBASIC14.69□□□□□ -0.06
SEC61A1P61619 SART3-203ENST00000546611 1184 ntBASIC14.69□□□□□ -0.06
SEC61A1P61619 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.69□□□□□ -0.06
SEC61A1P61619 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.69□□□□□ -0.06
SEC61A1P61619 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SEC61A1P61619 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.69□□□□□ -0.06
SEC61A1P61619 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
SEC61A1P61619 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
SEC61A1P61619 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SEC61A1P61619 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SEC61A1P61619 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SEC61A1P61619 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SEC61A1P61619 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SEC61A1P61619 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.69□□□□□ -0.06
SEC61A1P61619 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SEC61A1P61619 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.69□□□□□ -0.06
SEC61A1P61619 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
SEC61A1P61619 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SEC61A1P61619 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SEC61A1P61619 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SEC61A1P61619 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.69□□□□□ -0.06
SEC61A1P61619 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.69□□□□□ -0.06
SEC61A1P61619 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.69□□□□□ -0.06
SEC61A1P61619 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SEC61A1P61619 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.69□□□□□ -0.06
SEC61A1P61619 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
SEC61A1P61619 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SEC61A1P61619 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SEC61A1P61619 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SEC61A1P61619 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SEC61A1P61619 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.69□□□□□ -0.06
SEC61A1P61619 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.69□□□□□ -0.06
SEC61A1P61619 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.69□□□□□ -0.06
SEC61A1P61619 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SEC61A1P61619 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SEC61A1P61619 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
SEC61A1P61619 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
SEC61A1P61619 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.68□□□□□ -0.06
SEC61A1P61619 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.68□□□□□ -0.06
SEC61A1P61619 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SEC61A1P61619 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SEC61A1P61619 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SEC61A1P61619 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SEC61A1P61619 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SEC61A1P61619 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.68□□□□□ -0.06
SEC61A1P61619 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SEC61A1P61619 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SEC61A1P61619 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SEC61A1P61619 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
SEC61A1P61619 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SEC61A1P61619 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SEC61A1P61619 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.68□□□□□ -0.06
SEC61A1P61619 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SEC61A1P61619 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
SEC61A1P61619 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SEC61A1P61619 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SEC61A1P61619 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.68□□□□□ -0.06
SEC61A1P61619 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.68□□□□□ -0.06
SEC61A1P61619 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.68□□□□□ -0.06
SEC61A1P61619 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SEC61A1P61619 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
SEC61A1P61619 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SEC61A1P61619 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.68□□□□□ -0.06
SEC61A1P61619 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.68□□□□□ -0.06
SEC61A1P61619 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SEC61A1P61619 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.68□□□□□ -0.06
SEC61A1P61619 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SEC61A1P61619 AP000347.1-202ENST00000435868 847 ntBASIC14.68□□□□□ -0.06
SEC61A1P61619 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SEC61A1P61619 AF186996.4-201ENST00000467186 377 ntBASIC14.68□□□□□ -0.06
SEC61A1P61619 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.68□□□□□ -0.06
SEC61A1P61619 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SEC61A1P61619 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.68□□□□□ -0.06
SEC61A1P61619 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.68□□□□□ -0.06
SEC61A1P61619 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
SEC61A1P61619 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SEC61A1P61619 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SEC61A1P61619 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms