Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.25■□□□□ 0.03
CXCR4P61073 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.25■□□□□ 0.03
CXCR4P61073 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.25■□□□□ 0.03
CXCR4P61073 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.25■□□□□ 0.03
CXCR4P61073 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.25■□□□□ 0.03
CXCR4P61073 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.25■□□□□ 0.03
CXCR4P61073 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CXCR4P61073 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CXCR4P61073 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.25■□□□□ 0.03
CXCR4P61073 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.25■□□□□ 0.03
CXCR4P61073 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
CXCR4P61073 IGHV3-41-201ENST00000613121 348 ntBASIC15.25■□□□□ 0.03
CXCR4P61073 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.25■□□□□ 0.03
CXCR4P61073 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.25■□□□□ 0.03
CXCR4P61073 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.25■□□□□ 0.03
CXCR4P61073 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.25■□□□□ 0.03
CXCR4P61073 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CXCR4P61073 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CXCR4P61073 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CXCR4P61073 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CXCR4P61073 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CXCR4P61073 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CXCR4P61073 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CXCR4P61073 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CXCR4P61073 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CXCR4P61073 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CXCR4P61073 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
CXCR4P61073 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CXCR4P61073 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.25■□□□□ 0.03
CXCR4P61073 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.25■□□□□ 0.03
CXCR4P61073 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CXCR4P61073 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.25■□□□□ 0.03
CXCR4P61073 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CXCR4P61073 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CXCR4P61073 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
CXCR4P61073 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
CXCR4P61073 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CXCR4P61073 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CXCR4P61073 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
CXCR4P61073 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
CXCR4P61073 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.24■□□□□ 0.03
CXCR4P61073 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CXCR4P61073 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CXCR4P61073 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.24■□□□□ 0.03
CXCR4P61073 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.24■□□□□ 0.03
CXCR4P61073 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CXCR4P61073 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CXCR4P61073 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CXCR4P61073 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CXCR4P61073 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.24■□□□□ 0.03
CXCR4P61073 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.24■□□□□ 0.03
CXCR4P61073 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CXCR4P61073 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CXCR4P61073 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CXCR4P61073 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.24■□□□□ 0.03
CXCR4P61073 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CXCR4P61073 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.24■□□□□ 0.03
CXCR4P61073 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CXCR4P61073 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.24■□□□□ 0.03
CXCR4P61073 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CXCR4P61073 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.24■□□□□ 0.03
CXCR4P61073 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
CXCR4P61073 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.24■□□□□ 0.03
CXCR4P61073 AL845331.1-201ENST00000424978 1190 ntBASIC15.24■□□□□ 0.03
CXCR4P61073 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.24■□□□□ 0.03
CXCR4P61073 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CXCR4P61073 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CXCR4P61073 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CXCR4P61073 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CXCR4P61073 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.24■□□□□ 0.03
CXCR4P61073 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CXCR4P61073 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CXCR4P61073 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CXCR4P61073 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.24■□□□□ 0.03
CXCR4P61073 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CXCR4P61073 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CXCR4P61073 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.24■□□□□ 0.03
CXCR4P61073 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CXCR4P61073 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CXCR4P61073 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CXCR4P61073 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.24■□□□□ 0.03
CXCR4P61073 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CXCR4P61073 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CXCR4P61073 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CXCR4P61073 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CXCR4P61073 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CXCR4P61073 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.23■□□□□ 0.03
CXCR4P61073 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.23■□□□□ 0.03
CXCR4P61073 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CXCR4P61073 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.23■□□□□ 0.03
CXCR4P61073 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CXCR4P61073 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CXCR4P61073 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CXCR4P61073 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CXCR4P61073 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CXCR4P61073 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CXCR4P61073 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.23■□□□□ 0.03
CXCR4P61073 AP002414.1-201ENST00000391405 1147 ntBASIC15.23■□□□□ 0.03
CXCR4P61073 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.23■□□□□ 0.03
CXCR4P61073 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms