Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC079140.1-201ENST00000508039 487 ntBASIC18.81■□□□□ 0.6
USP11P51784 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.81■□□□□ 0.6
USP11P51784 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.81■□□□□ 0.6
USP11P51784 LINC01225-203ENST00000563550 1244 ntBASIC18.81■□□□□ 0.6
USP11P51784 AC022145.2-201ENST00000598203 171 ntBASIC18.81■□□□□ 0.6
USP11P51784 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.81■□□□□ 0.6
USP11P51784 AL691403.2-201ENST00000618460 490 ntBASIC18.81■□□□□ 0.6
USP11P51784 AC079781.4-201ENST00000641908 219 ntBASIC18.81■□□□□ 0.6
USP11P51784 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
USP11P51784 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
USP11P51784 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP11P51784 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP11P51784 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP11P51784 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP11P51784 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
USP11P51784 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.81■□□□□ 0.6
USP11P51784 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
USP11P51784 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP11P51784 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
USP11P51784 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.81■□□□□ 0.6
USP11P51784 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.8■□□□□ 0.6
USP11P51784 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.8■□□□□ 0.6
USP11P51784 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP11P51784 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.8■□□□□ 0.6
USP11P51784 UBALD1-205ENST00000590891 2641 ntBASIC18.8■□□□□ 0.6
USP11P51784 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP11P51784 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP11P51784 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.8■□□□□ 0.6
USP11P51784 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP11P51784 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP11P51784 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP11P51784 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP11P51784 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.8■□□□□ 0.6
USP11P51784 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.8■□□□□ 0.6
USP11P51784 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.8■□□□□ 0.6
USP11P51784 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.8■□□□□ 0.6
USP11P51784 TIMM8BP1-201ENST00000452384 211 ntBASIC18.8■□□□□ 0.6
USP11P51784 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.8■□□□□ 0.6
USP11P51784 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.8■□□□□ 0.6
USP11P51784 AC008267.7-201ENST00000624570 1194 ntBASIC18.8■□□□□ 0.6
USP11P51784 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USP11P51784 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.8■□□□□ 0.6
USP11P51784 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP11P51784 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.8■□□□□ 0.6
USP11P51784 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP11P51784 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
USP11P51784 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USP11P51784 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP11P51784 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP11P51784 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP11P51784 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.79■□□□□ 0.6
USP11P51784 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP11P51784 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.79■□□□□ 0.6
USP11P51784 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
USP11P51784 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP11P51784 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP11P51784 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.79■□□□□ 0.6
USP11P51784 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
USP11P51784 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.79■□□□□ 0.6
USP11P51784 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.79■□□□□ 0.6
USP11P51784 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP11P51784 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP11P51784 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP11P51784 AC004461.1-201ENST00000412461 403 ntBASIC18.79■□□□□ 0.6
USP11P51784 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.79■□□□□ 0.6
USP11P51784 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
USP11P51784 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.79■□□□□ 0.6
USP11P51784 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.79■□□□□ 0.6
USP11P51784 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
USP11P51784 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.79■□□□□ 0.6
USP11P51784 KRT8P23-201ENST00000560090 1207 ntBASIC18.79■□□□□ 0.6
USP11P51784 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.79■□□□□ 0.6
USP11P51784 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.79■□□□□ 0.6
USP11P51784 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.79■□□□□ 0.6
USP11P51784 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
USP11P51784 AC084121.4-201ENST00000641598 221 ntBASIC18.79■□□□□ 0.6
USP11P51784 AF228730.8-201ENST00000642140 221 ntBASIC18.79■□□□□ 0.6
USP11P51784 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP11P51784 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP11P51784 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.79■□□□□ 0.6
USP11P51784 LINC01144-201ENST00000626198 1710 ntBASIC18.79■□□□□ 0.6
USP11P51784 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
USP11P51784 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP11P51784 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.79■□□□□ 0.6
USP11P51784 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP11P51784 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP11P51784 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
USP11P51784 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP11P51784 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.78■□□□□ 0.6
USP11P51784 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
USP11P51784 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP11P51784 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
USP11P51784 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP11P51784 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.78■□□□□ 0.6
USP11P51784 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP11P51784 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP11P51784 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP11P51784 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
USP11P51784 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.78■□□□□ 0.6
USP11P51784 SPCS2P4-201ENST00000436160 681 ntBASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms