Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PCP4P48539 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC11.29□□□□□ -0.6
PCP4P48539 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PCP4P48539 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC11.29□□□□□ -0.6
PCP4P48539 SLCO2B1-204ENST00000454962 3219 ntTSL 2 BASIC11.29□□□□□ -0.6
PCP4P48539 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC11.29□□□□□ -0.6
PCP4P48539 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC11.29□□□□□ -0.6
PCP4P48539 GTSE1-AS1-202ENST00000623117 1518 ntBASIC11.29□□□□□ -0.6
PCP4P48539 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC11.29□□□□□ -0.6
PCP4P48539 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PCP4P48539 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
PCP4P48539 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
PCP4P48539 PLA2G15-201ENST00000219345 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PCP4P48539 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
PCP4P48539 ITIH1-201ENST00000273283 2911 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PCP4P48539 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
PCP4P48539 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PCP4P48539 GOLGA2P5-201ENST00000266746 2395 ntBASIC11.28□□□□□ -0.6
PCP4P48539 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC11.28□□□□□ -0.6
PCP4P48539 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC11.28□□□□□ -0.6
PCP4P48539 UBA52-202ENST00000442744 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PCP4P48539 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
PCP4P48539 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
PCP4P48539 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
PCP4P48539 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PCP4P48539 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
PCP4P48539 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
PCP4P48539 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
PCP4P48539 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC11.28□□□□□ -0.6
PCP4P48539 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
PCP4P48539 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC11.28□□□□□ -0.6
PCP4P48539 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
PCP4P48539 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC11.28□□□□□ -0.6
PCP4P48539 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
PCP4P48539 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
PCP4P48539 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
PCP4P48539 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
PCP4P48539 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
PCP4P48539 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
PCP4P48539 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
PCP4P48539 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PCP4P48539 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
PCP4P48539 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
PCP4P48539 RN7SL371P-201ENST00000578099 267 ntBASIC11.28□□□□□ -0.6
PCP4P48539 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PCP4P48539 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PCP4P48539 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PCP4P48539 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
PCP4P48539 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PCP4P48539 AC131888.1-201ENST00000625028 2168 ntBASIC11.28□□□□□ -0.6
PCP4P48539 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC11.28□□□□□ -0.6
PCP4P48539 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
PCP4P48539 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
PCP4P48539 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
PCP4P48539 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC11.28□□□□□ -0.6
PCP4P48539 GADL1-201ENST00000282538 3759 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
PCP4P48539 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PCP4P48539 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
PCP4P48539 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PCP4P48539 SLC4A5-202ENST00000358683 3142 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
PCP4P48539 OSBP2-208ENST00000437268 3580 ntTSL 2 BASIC11.28□□□□□ -0.6
PCP4P48539 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC11.28□□□□□ -0.6
PCP4P48539 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
PCP4P48539 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PCP4P48539 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
PCP4P48539 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PCP4P48539 IKZF4-203ENST00000547167 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PCP4P48539 CCDC114-201ENST00000315396 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PCP4P48539 ILF3-219ENST00000590261 3219 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
PCP4P48539 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
PCP4P48539 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
PCP4P48539 TLE3-222ENST00000560589 3509 ntTSL 5 BASIC11.27□□□□□ -0.6
PCP4P48539 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
PCP4P48539 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
PCP4P48539 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC11.27□□□□□ -0.6
PCP4P48539 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC11.27□□□□□ -0.6
PCP4P48539 NIN-202ENST00000324330 4364 ntTSL 5 BASIC11.27□□□□□ -0.6
PCP4P48539 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.6
PCP4P48539 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
PCP4P48539 OTOF-204ENST00000402415 5108 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
PCP4P48539 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC11.27□□□□□ -0.6
PCP4P48539 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
PCP4P48539 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
PCP4P48539 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
PCP4P48539 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
PCP4P48539 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
PCP4P48539 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
PCP4P48539 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
PCP4P48539 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
PCP4P48539 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC11.27□□□□□ -0.61
PCP4P48539 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC11.27□□□□□ -0.61
PCP4P48539 C17orf53-202ENST00000319977 2725 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
PCP4P48539 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
PCP4P48539 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
PCP4P48539 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC11.27□□□□□ -0.61
PCP4P48539 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PCP4P48539 COG4-202ENST00000393612 2756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
PCP4P48539 C8orf17-202ENST00000625034 2775 ntBASIC11.27□□□□□ -0.61
PCP4P48539 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
PCP4P48539 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms