Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC13.81□□□□□ -0.2
SNCAP37840 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC13.81□□□□□ -0.2
SNCAP37840 RNF126P1-202ENST00000569893 925 ntBASIC13.81□□□□□ -0.2
SNCAP37840 AC011840.4-201ENST00000578471 627 ntBASIC13.81□□□□□ -0.2
SNCAP37840 AC012306.2-201ENST00000609350 630 ntBASIC13.81□□□□□ -0.2
SNCAP37840 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SNCAP37840 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNCAP37840 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.81□□□□□ -0.2
SNCAP37840 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.81□□□□□ -0.2
SNCAP37840 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.81□□□□□ -0.2
SNCAP37840 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNCAP37840 FAM45BP-202ENST00000592932 1624 ntBASIC13.81□□□□□ -0.2
SNCAP37840 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.81□□□□□ -0.2
SNCAP37840 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.81□□□□□ -0.2
SNCAP37840 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SNCAP37840 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNCAP37840 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SNCAP37840 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNCAP37840 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.81□□□□□ -0.2
SNCAP37840 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SNCAP37840 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.81□□□□□ -0.2
SNCAP37840 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.81□□□□□ -0.2
SNCAP37840 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNCAP37840 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNCAP37840 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNCAP37840 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNCAP37840 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNCAP37840 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNCAP37840 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNCAP37840 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC13.8□□□□□ -0.2
SNCAP37840 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SNCAP37840 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNCAP37840 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.8□□□□□ -0.2
SNCAP37840 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
SNCAP37840 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.8□□□□□ -0.2
SNCAP37840 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SNCAP37840 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SNCAP37840 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNCAP37840 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC13.8□□□□□ -0.2
SNCAP37840 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC13.8□□□□□ -0.2
SNCAP37840 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNCAP37840 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNCAP37840 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
SNCAP37840 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.8□□□□□ -0.2
SNCAP37840 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC13.8□□□□□ -0.2
SNCAP37840 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC13.8□□□□□ -0.2
SNCAP37840 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SNCAP37840 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNCAP37840 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNCAP37840 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SNCAP37840 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNCAP37840 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SNCAP37840 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNCAP37840 ENSA-206ENST00000361631 725 ntTSL 2 BASIC13.8□□□□□ -0.2
SNCAP37840 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNCAP37840 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SNCAP37840 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
SNCAP37840 AC122714.2-201ENST00000502787 707 ntBASIC13.8□□□□□ -0.2
SNCAP37840 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
SNCAP37840 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNCAP37840 CD320-202ENST00000537716 1119 ntTSL 2 BASIC13.8□□□□□ -0.2
SNCAP37840 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC13.8□□□□□ -0.2
SNCAP37840 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SNCAP37840 CLN6-204ENST00000564752 900 ntTSL 3 BASIC13.8□□□□□ -0.2
SNCAP37840 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC13.8□□□□□ -0.2
SNCAP37840 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC13.8□□□□□ -0.2
SNCAP37840 AC090616.6-201ENST00000582640 721 ntBASIC13.8□□□□□ -0.2
SNCAP37840 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC13.8□□□□□ -0.2
SNCAP37840 AC124864.1-201ENST00000623408 392 ntBASIC13.8□□□□□ -0.2
SNCAP37840 CLN6-214ENST00000636314 442 ntTSL 3 BASIC13.8□□□□□ -0.2
SNCAP37840 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNCAP37840 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.8□□□□□ -0.2
SNCAP37840 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SNCAP37840 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SNCAP37840 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNCAP37840 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SNCAP37840 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNCAP37840 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SNCAP37840 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.8□□□□□ -0.2
SNCAP37840 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNCAP37840 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNCAP37840 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNCAP37840 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNCAP37840 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNCAP37840 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SNCAP37840 MTHFR-217ENST00000641820 1569 ntBASIC13.79□□□□□ -0.2
SNCAP37840 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
SNCAP37840 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.79□□□□□ -0.2
SNCAP37840 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC13.79□□□□□ -0.2
SNCAP37840 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNCAP37840 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNCAP37840 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNCAP37840 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.79□□□□□ -0.2
SNCAP37840 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNCAP37840 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNCAP37840 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SNCAP37840 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNCAP37840 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SNCAP37840 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNCAP37840 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms