Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.56■□□□□ 0.08
TNFRSF1BP20333 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.56■□□□□ 0.08
TNFRSF1BP20333 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNFRSF1BP20333 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.56■□□□□ 0.08
TNFRSF1BP20333 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.56■□□□□ 0.08
TNFRSF1BP20333 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TNFRSF1BP20333 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNFRSF1BP20333 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TNFRSF1BP20333 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.56■□□□□ 0.08
TNFRSF1BP20333 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TNFRSF1BP20333 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.56■□□□□ 0.08
TNFRSF1BP20333 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.56■□□□□ 0.08
TNFRSF1BP20333 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.56■□□□□ 0.08
TNFRSF1BP20333 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.56■□□□□ 0.08
TNFRSF1BP20333 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
TNFRSF1BP20333 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TNFRSF1BP20333 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNFRSF1BP20333 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TNFRSF1BP20333 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNFRSF1BP20333 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.56■□□□□ 0.08
TNFRSF1BP20333 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNFRSF1BP20333 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TNFRSF1BP20333 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TNFRSF1BP20333 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.55■□□□□ 0.08
TNFRSF1BP20333 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNFRSF1BP20333 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.55■□□□□ 0.08
TNFRSF1BP20333 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNFRSF1BP20333 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TNFRSF1BP20333 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.55■□□□□ 0.08
TNFRSF1BP20333 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.55■□□□□ 0.08
TNFRSF1BP20333 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.55■□□□□ 0.08
TNFRSF1BP20333 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.55■□□□□ 0.08
TNFRSF1BP20333 AL512652.2-201ENST00000625156 1716 ntBASIC15.55■□□□□ 0.08
TNFRSF1BP20333 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNFRSF1BP20333 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TNFRSF1BP20333 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
TNFRSF1BP20333 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TNFRSF1BP20333 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNFRSF1BP20333 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.55■□□□□ 0.08
TNFRSF1BP20333 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.55■□□□□ 0.08
TNFRSF1BP20333 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
TNFRSF1BP20333 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNFRSF1BP20333 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.55■□□□□ 0.08
TNFRSF1BP20333 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNFRSF1BP20333 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNFRSF1BP20333 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNFRSF1BP20333 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNFRSF1BP20333 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNFRSF1BP20333 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNFRSF1BP20333 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 NKAPP1-205ENST00000585790 367 ntBASIC15.54■□□□□ 0.08
TNFRSF1BP20333 AL732292.2-201ENST00000609649 430 ntBASIC15.54■□□□□ 0.08
TNFRSF1BP20333 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 AL590326.2-201ENST00000625139 305 ntBASIC15.54■□□□□ 0.08
TNFRSF1BP20333 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TNFRSF1BP20333 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TNFRSF1BP20333 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.53■□□□□ 0.08
TNFRSF1BP20333 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TNFRSF1BP20333 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.53■□□□□ 0.08
TNFRSF1BP20333 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.53■□□□□ 0.08
TNFRSF1BP20333 NCF1C-201ENST00000438382 1427 ntBASIC15.53■□□□□ 0.08
TNFRSF1BP20333 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms