Protein–RNA interactions for Protein: P17482

HOXB9, Homeobox protein Hox-B9, humanhuman

Predicted RBP Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB9P17482 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HOXB9P17482 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.7■□□□□ 0.1
HOXB9P17482 PAUPAR-201ENST00000630360 2965 ntBASIC15.7■□□□□ 0.1
HOXB9P17482 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HOXB9P17482 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HOXB9P17482 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HOXB9P17482 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HOXB9P17482 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HOXB9P17482 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HOXB9P17482 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.7■□□□□ 0.1
HOXB9P17482 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.7■□□□□ 0.1
HOXB9P17482 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HOXB9P17482 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXB9P17482 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXB9P17482 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HOXB9P17482 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HOXB9P17482 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HOXB9P17482 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXB9P17482 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
HOXB9P17482 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.69■□□□□ 0.1
HOXB9P17482 LINC01144-201ENST00000626198 1710 ntBASIC15.69■□□□□ 0.1
HOXB9P17482 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXB9P17482 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXB9P17482 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXB9P17482 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HOXB9P17482 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.69■□□□□ 0.1
HOXB9P17482 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.69■□□□□ 0.1
HOXB9P17482 KRT18P35-201ENST00000510488 1269 ntBASIC15.69■□□□□ 0.1
HOXB9P17482 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.69■□□□□ 0.1
HOXB9P17482 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.69■□□□□ 0.1
HOXB9P17482 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.69■□□□□ 0.1
HOXB9P17482 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXB9P17482 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HOXB9P17482 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.69■□□□□ 0.1
HOXB9P17482 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.69■□□□□ 0.1
HOXB9P17482 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.69■□□□□ 0.1
HOXB9P17482 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXB9P17482 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HOXB9P17482 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXB9P17482 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXB9P17482 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXB9P17482 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXB9P17482 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
HOXB9P17482 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HOXB9P17482 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HOXB9P17482 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXB9P17482 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HOXB9P17482 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXB9P17482 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HOXB9P17482 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXB9P17482 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
HOXB9P17482 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
HOXB9P17482 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXB9P17482 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
HOXB9P17482 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
HOXB9P17482 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXB9P17482 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXB9P17482 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HOXB9P17482 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXB9P17482 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXB9P17482 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXB9P17482 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.68■□□□□ 0.1
HOXB9P17482 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.68■□□□□ 0.1
HOXB9P17482 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HOXB9P17482 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.68■□□□□ 0.1
HOXB9P17482 AL353732.1-201ENST00000569618 1459 ntBASIC15.68■□□□□ 0.1
HOXB9P17482 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.68■□□□□ 0.1
HOXB9P17482 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HOXB9P17482 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXB9P17482 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXB9P17482 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.68■□□□□ 0.1
HOXB9P17482 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.68■□□□□ 0.1
HOXB9P17482 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.68■□□□□ 0.1
HOXB9P17482 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.68■□□□□ 0.1
HOXB9P17482 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXB9P17482 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.68■□□□□ 0.1
HOXB9P17482 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXB9P17482 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.68■□□□□ 0.1
HOXB9P17482 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXB9P17482 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.68■□□□□ 0.1
HOXB9P17482 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HOXB9P17482 PI4KAP1-204ENST00000612579 1703 ntBASIC15.68■□□□□ 0.1
HOXB9P17482 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXB9P17482 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXB9P17482 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
HOXB9P17482 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.68■□□□□ 0.1
HOXB9P17482 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HOXB9P17482 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXB9P17482 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXB9P17482 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXB9P17482 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
HOXB9P17482 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HOXB9P17482 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HOXB9P17482 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
HOXB9P17482 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HOXB9P17482 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HOXB9P17482 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.67■□□□□ 0.1
HOXB9P17482 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.67■□□□□ 0.1
HOXB9P17482 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.67■□□□□ 0.1
HOXB9P17482 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms