Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.83■□□□□ 0.12
NCK1P16333 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.83■□□□□ 0.12
NCK1P16333 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.83■□□□□ 0.12
NCK1P16333 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.83■□□□□ 0.12
NCK1P16333 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.83■□□□□ 0.12
NCK1P16333 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.83■□□□□ 0.12
NCK1P16333 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
NCK1P16333 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.83■□□□□ 0.12
NCK1P16333 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NCK1P16333 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NCK1P16333 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NCK1P16333 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NCK1P16333 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NCK1P16333 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.83■□□□□ 0.12
NCK1P16333 PMPCAP1-201ENST00000508114 1576 ntBASIC15.83■□□□□ 0.12
NCK1P16333 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NCK1P16333 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.83■□□□□ 0.12
NCK1P16333 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NCK1P16333 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NCK1P16333 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NCK1P16333 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NCK1P16333 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NCK1P16333 GGT4P-201ENST00000623672 1708 ntBASIC15.82■□□□□ 0.12
NCK1P16333 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.82■□□□□ 0.12
NCK1P16333 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NCK1P16333 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.82■□□□□ 0.12
NCK1P16333 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NCK1P16333 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.82■□□□□ 0.12
NCK1P16333 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NCK1P16333 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NCK1P16333 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NCK1P16333 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
NCK1P16333 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NCK1P16333 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NCK1P16333 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NCK1P16333 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NCK1P16333 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.82■□□□□ 0.12
NCK1P16333 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.82■□□□□ 0.12
NCK1P16333 AC246785.2-201ENST00000432512 513 ntBASIC15.82■□□□□ 0.12
NCK1P16333 AC093827.2-201ENST00000512654 315 ntBASIC15.82■□□□□ 0.12
NCK1P16333 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.82■□□□□ 0.12
NCK1P16333 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NCK1P16333 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.82■□□□□ 0.12
NCK1P16333 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.82■□□□□ 0.12
NCK1P16333 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.82■□□□□ 0.12
NCK1P16333 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.82■□□□□ 0.12
NCK1P16333 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.82■□□□□ 0.12
NCK1P16333 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NCK1P16333 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NCK1P16333 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
NCK1P16333 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NCK1P16333 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NCK1P16333 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.82■□□□□ 0.12
NCK1P16333 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.82■□□□□ 0.12
NCK1P16333 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
NCK1P16333 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.82■□□□□ 0.12
NCK1P16333 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
NCK1P16333 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NCK1P16333 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NCK1P16333 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NCK1P16333 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.82■□□□□ 0.12
NCK1P16333 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NCK1P16333 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NCK1P16333 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.82■□□□□ 0.12
NCK1P16333 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NCK1P16333 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NCK1P16333 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
NCK1P16333 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NCK1P16333 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
NCK1P16333 PRAL-201ENST00000624952 3286 ntBASIC15.81■□□□□ 0.12
NCK1P16333 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NCK1P16333 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NCK1P16333 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NCK1P16333 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NCK1P16333 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NCK1P16333 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NCK1P16333 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NCK1P16333 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NCK1P16333 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NCK1P16333 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.81■□□□□ 0.12
NCK1P16333 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
NCK1P16333 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.81■□□□□ 0.12
NCK1P16333 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.81■□□□□ 0.12
NCK1P16333 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NCK1P16333 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.81■□□□□ 0.12
NCK1P16333 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.81■□□□□ 0.12
NCK1P16333 AC006449.6-201ENST00000612330 2296 ntBASIC15.81■□□□□ 0.12
NCK1P16333 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
NCK1P16333 AC097493.4-201ENST00000641197 219 ntBASIC15.81■□□□□ 0.12
NCK1P16333 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
NCK1P16333 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
NCK1P16333 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NCK1P16333 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.81■□□□□ 0.12
NCK1P16333 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NCK1P16333 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NCK1P16333 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NCK1P16333 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
NCK1P16333 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NCK1P16333 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NCK1P16333 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms