Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.65■□□□□ 0.1
CCL4P13236 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL4P13236 OR6D1P-202ENST00000641007 5290 ntBASIC15.65■□□□□ 0.1
CCL4P13236 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL4P13236 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CCL4P13236 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL4P13236 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL4P13236 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.65■□□□□ 0.1
CCL4P13236 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.65■□□□□ 0.1
CCL4P13236 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL4P13236 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL4P13236 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL4P13236 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCL4P13236 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL4P13236 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL4P13236 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCL4P13236 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.65■□□□□ 0.1
CCL4P13236 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CCL4P13236 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.65■□□□□ 0.1
CCL4P13236 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCL4P13236 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL4P13236 NME2P1-201ENST00000426182 414 ntBASIC15.65■□□□□ 0.1
CCL4P13236 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.65■□□□□ 0.1
CCL4P13236 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.65■□□□□ 0.1
CCL4P13236 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CCL4P13236 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CCL4P13236 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.65■□□□□ 0.1
CCL4P13236 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.65■□□□□ 0.1
CCL4P13236 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.65■□□□□ 0.1
CCL4P13236 AL133215.2-201ENST00000609242 977 ntBASIC15.65■□□□□ 0.1
CCL4P13236 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.65■□□□□ 0.1
CCL4P13236 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CCL4P13236 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CCL4P13236 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.65■□□□□ 0.1
CCL4P13236 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CCL4P13236 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CCL4P13236 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL4P13236 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL4P13236 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL4P13236 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL4P13236 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL4P13236 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.65■□□□□ 0.1
CCL4P13236 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL4P13236 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL4P13236 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CCL4P13236 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CCL4P13236 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL4P13236 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.65■□□□□ 0.1
CCL4P13236 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.65■□□□□ 0.1
CCL4P13236 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.65■□□□□ 0.1
CCL4P13236 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CCL4P13236 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.64■□□□□ 0.09
CCL4P13236 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.64■□□□□ 0.09
CCL4P13236 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL4P13236 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CCL4P13236 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL4P13236 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCL4P13236 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL4P13236 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCL4P13236 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL4P13236 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CCL4P13236 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CCL4P13236 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CCL4P13236 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL4P13236 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL4P13236 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL4P13236 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL4P13236 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCL4P13236 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCL4P13236 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL4P13236 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.64■□□□□ 0.09
CCL4P13236 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL4P13236 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.64■□□□□ 0.09
CCL4P13236 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCL4P13236 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.64■□□□□ 0.09
CCL4P13236 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCL4P13236 CR383656.12-201ENST00000549567 513 ntBASIC15.64■□□□□ 0.09
CCL4P13236 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.64■□□□□ 0.09
CCL4P13236 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.64■□□□□ 0.09
CCL4P13236 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.64■□□□□ 0.09
CCL4P13236 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.64■□□□□ 0.09
CCL4P13236 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.64■□□□□ 0.09
CCL4P13236 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.64■□□□□ 0.09
CCL4P13236 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.64■□□□□ 0.09
CCL4P13236 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL4P13236 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CCL4P13236 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL4P13236 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CCL4P13236 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCL4P13236 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CCL4P13236 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.64■□□□□ 0.09
CCL4P13236 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CCL4P13236 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.64■□□□□ 0.09
CCL4P13236 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL4P13236 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.64■□□□□ 0.09
CCL4P13236 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
CCL4P13236 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.63■□□□□ 0.09
CCL4P13236 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.63■□□□□ 0.09
CCL4P13236 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CCL4P13236 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms