Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.33■□□□□ 0.2
PCNAP12004 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.33■□□□□ 0.2
PCNAP12004 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.33■□□□□ 0.2
PCNAP12004 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.33■□□□□ 0.2
PCNAP12004 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.33■□□□□ 0.2
PCNAP12004 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.33■□□□□ 0.2
PCNAP12004 DUX4L17-201ENST00000557360 1267 ntBASIC16.33■□□□□ 0.2
PCNAP12004 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCNAP12004 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCNAP12004 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.33■□□□□ 0.2
PCNAP12004 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.33■□□□□ 0.2
PCNAP12004 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
PCNAP12004 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCNAP12004 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.33■□□□□ 0.2
PCNAP12004 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCNAP12004 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCNAP12004 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCNAP12004 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.33■□□□□ 0.2
PCNAP12004 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PCNAP12004 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCNAP12004 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
PCNAP12004 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCNAP12004 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
PCNAP12004 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCNAP12004 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCNAP12004 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCNAP12004 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCNAP12004 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCNAP12004 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCNAP12004 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCNAP12004 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCNAP12004 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCNAP12004 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCNAP12004 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCNAP12004 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
PCNAP12004 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PCNAP12004 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PCNAP12004 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.32■□□□□ 0.2
PCNAP12004 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCNAP12004 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PCNAP12004 AL450487.1-201ENST00000426799 995 ntBASIC16.32■□□□□ 0.2
PCNAP12004 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCNAP12004 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.32■□□□□ 0.2
PCNAP12004 AF186996.4-201ENST00000467186 377 ntBASIC16.32■□□□□ 0.2
PCNAP12004 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCNAP12004 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCNAP12004 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCNAP12004 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.32■□□□□ 0.2
PCNAP12004 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCNAP12004 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.32■□□□□ 0.2
PCNAP12004 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCNAP12004 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.32■□□□□ 0.2
PCNAP12004 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.32■□□□□ 0.2
PCNAP12004 RN7SL510P-201ENST00000581311 263 ntBASIC16.32■□□□□ 0.2
PCNAP12004 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.32■□□□□ 0.2
PCNAP12004 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.32■□□□□ 0.2
PCNAP12004 AC006449.5-201ENST00000610658 2098 ntBASIC16.32■□□□□ 0.2
PCNAP12004 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCNAP12004 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.32■□□□□ 0.2
PCNAP12004 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCNAP12004 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PCNAP12004 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCNAP12004 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCNAP12004 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.31■□□□□ 0.2
PCNAP12004 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCNAP12004 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCNAP12004 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PCNAP12004 AL645728.1-201ENST00000366221 2101 ntBASIC16.31■□□□□ 0.2
PCNAP12004 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PCNAP12004 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PCNAP12004 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.31■□□□□ 0.2
PCNAP12004 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCNAP12004 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCNAP12004 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
PCNAP12004 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PCNAP12004 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCNAP12004 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCNAP12004 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
PCNAP12004 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PCNAP12004 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
PCNAP12004 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCNAP12004 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.31■□□□□ 0.2
PCNAP12004 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCNAP12004 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCNAP12004 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCNAP12004 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCNAP12004 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PCNAP12004 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCNAP12004 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.31■□□□□ 0.2
PCNAP12004 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.31■□□□□ 0.2
PCNAP12004 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
PCNAP12004 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.31■□□□□ 0.2
PCNAP12004 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCNAP12004 AC079781.3-201ENST00000449110 356 ntBASIC16.31■□□□□ 0.2
PCNAP12004 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.31■□□□□ 0.2
PCNAP12004 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCNAP12004 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.31■□□□□ 0.2
PCNAP12004 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
PCNAP12004 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.31■□□□□ 0.2
PCNAP12004 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms