Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
APOA4P06727 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
APOA4P06727 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
APOA4P06727 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
APOA4P06727 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
APOA4P06727 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
APOA4P06727 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
APOA4P06727 MRPL3P1-201ENST00000400109 1033 ntBASIC16.77■□□□□ 0.28
APOA4P06727 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.77■□□□□ 0.28
APOA4P06727 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
APOA4P06727 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.77■□□□□ 0.28
APOA4P06727 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.77■□□□□ 0.28
APOA4P06727 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
APOA4P06727 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.77■□□□□ 0.28
APOA4P06727 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.77■□□□□ 0.28
APOA4P06727 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.77■□□□□ 0.28
APOA4P06727 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.77■□□□□ 0.28
APOA4P06727 GGTLC5P-201ENST00000617623 998 ntBASIC16.77■□□□□ 0.28
APOA4P06727 AC005593.1-201ENST00000624894 515 ntBASIC16.77■□□□□ 0.28
APOA4P06727 AL139011.1-202ENST00000642063 584 ntBASIC16.77■□□□□ 0.28
APOA4P06727 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
APOA4P06727 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.77■□□□□ 0.28
APOA4P06727 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
APOA4P06727 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
APOA4P06727 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.27
APOA4P06727 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
APOA4P06727 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
APOA4P06727 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
APOA4P06727 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
APOA4P06727 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
APOA4P06727 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
APOA4P06727 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
APOA4P06727 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
APOA4P06727 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.76■□□□□ 0.27
APOA4P06727 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
APOA4P06727 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.76■□□□□ 0.27
APOA4P06727 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
APOA4P06727 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
APOA4P06727 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
APOA4P06727 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.76■□□□□ 0.27
APOA4P06727 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.76■□□□□ 0.27
APOA4P06727 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.76■□□□□ 0.27
APOA4P06727 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.76■□□□□ 0.27
APOA4P06727 AC012640.2-201ENST00000561606 901 ntBASIC16.76■□□□□ 0.27
APOA4P06727 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.76■□□□□ 0.27
APOA4P06727 SLC25A6P4-201ENST00000586535 553 ntBASIC16.76■□□□□ 0.27
APOA4P06727 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
APOA4P06727 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.76■□□□□ 0.27
APOA4P06727 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
APOA4P06727 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
APOA4P06727 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
APOA4P06727 ME2P1-201ENST00000426028 1970 ntBASIC16.76■□□□□ 0.27
APOA4P06727 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
APOA4P06727 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.76■□□□□ 0.27
APOA4P06727 KRT8P49-201ENST00000604166 1432 ntBASIC16.76■□□□□ 0.27
APOA4P06727 AL662844.4-201ENST00000606367 2838 ntBASIC16.76■□□□□ 0.27
APOA4P06727 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
APOA4P06727 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
APOA4P06727 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
APOA4P06727 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
APOA4P06727 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
APOA4P06727 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.76■□□□□ 0.27
APOA4P06727 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.76■□□□□ 0.27
APOA4P06727 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.76■□□□□ 0.27
APOA4P06727 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
APOA4P06727 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
APOA4P06727 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
APOA4P06727 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
APOA4P06727 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
APOA4P06727 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
APOA4P06727 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.75■□□□□ 0.27
APOA4P06727 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
APOA4P06727 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
APOA4P06727 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
APOA4P06727 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.75■□□□□ 0.27
APOA4P06727 AP002414.3-201ENST00000589352 1468 ntBASIC16.75■□□□□ 0.27
APOA4P06727 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
APOA4P06727 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
APOA4P06727 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
APOA4P06727 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
APOA4P06727 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
APOA4P06727 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
APOA4P06727 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
APOA4P06727 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
APOA4P06727 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
APOA4P06727 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.75■□□□□ 0.27
APOA4P06727 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.75■□□□□ 0.27
APOA4P06727 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.75■□□□□ 0.27
APOA4P06727 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
APOA4P06727 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
APOA4P06727 PAWRP1-201ENST00000451083 565 ntBASIC16.75■□□□□ 0.27
APOA4P06727 AC009078.2-202ENST00000463353 338 ntBASIC16.75■□□□□ 0.27
APOA4P06727 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.75■□□□□ 0.27
APOA4P06727 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
APOA4P06727 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
APOA4P06727 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.75■□□□□ 0.27
APOA4P06727 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
APOA4P06727 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
APOA4P06727 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
APOA4P06727 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms