Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COL5A2P05997 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL5A2P05997 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL5A2P05997 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
COL5A2P05997 STX1A-203ENST00000395155 783 ntTSL 2 BASIC21.59■■□□□ 1.05
COL5A2P05997 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC21.59■■□□□ 1.05
COL5A2P05997 AL355994.2-201ENST00000447882 704 ntBASIC21.59■■□□□ 1.05
COL5A2P05997 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC21.59■■□□□ 1.05
COL5A2P05997 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC21.59■■□□□ 1.05
COL5A2P05997 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC21.59■■□□□ 1.05
COL5A2P05997 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC21.59■■□□□ 1.05
COL5A2P05997 MIR6869-201ENST00000619434 62 ntBASIC21.59■■□□□ 1.05
COL5A2P05997 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL5A2P05997 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL5A2P05997 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC21.59■■□□□ 1.05
COL5A2P05997 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
COL5A2P05997 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL5A2P05997 AL136982.4-201ENST00000437689 1740 ntBASIC21.59■■□□□ 1.05
COL5A2P05997 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL5A2P05997 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL5A2P05997 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL5A2P05997 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
COL5A2P05997 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL5A2P05997 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL5A2P05997 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC21.58■■□□□ 1.05
COL5A2P05997 CTBP2P5-201ENST00000454986 1264 ntBASIC21.58■■□□□ 1.05
COL5A2P05997 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC21.58■■□□□ 1.05
COL5A2P05997 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC21.58■■□□□ 1.05
COL5A2P05997 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC21.58■■□□□ 1.05
COL5A2P05997 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC21.58■■□□□ 1.05
COL5A2P05997 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC21.58■■□□□ 1.05
COL5A2P05997 GPR182-203ENST00000622922 591 ntBASIC21.58■■□□□ 1.05
COL5A2P05997 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.58■■□□□ 1.05
COL5A2P05997 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COL5A2P05997 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL5A2P05997 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL5A2P05997 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL5A2P05997 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
COL5A2P05997 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC21.58■■□□□ 1.05
COL5A2P05997 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL5A2P05997 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
COL5A2P05997 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.58■■□□□ 1.04
COL5A2P05997 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC21.58■■□□□ 1.04
COL5A2P05997 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC21.58■■□□□ 1.04
COL5A2P05997 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC21.58■■□□□ 1.04
COL5A2P05997 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
COL5A2P05997 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC21.58■■□□□ 1.04
COL5A2P05997 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC21.58■■□□□ 1.04
COL5A2P05997 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC21.58■■□□□ 1.04
COL5A2P05997 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC21.58■■□□□ 1.04
COL5A2P05997 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL5A2P05997 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC21.58■■□□□ 1.04
COL5A2P05997 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC21.57■■□□□ 1.04
COL5A2P05997 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL5A2P05997 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC21.57■■□□□ 1.04
COL5A2P05997 GATB-213ENST00000515812 1893 ntTSL 5 BASIC21.57■■□□□ 1.04
COL5A2P05997 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
COL5A2P05997 DEK-201ENST00000244776 1441 ntTSL 2 BASIC21.57■■□□□ 1.04
COL5A2P05997 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC21.57■■□□□ 1.04
COL5A2P05997 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL5A2P05997 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL5A2P05997 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL5A2P05997 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL5A2P05997 TUBB1P2-201ENST00000422712 1306 ntBASIC21.57■■□□□ 1.04
COL5A2P05997 TUBB1P1-201ENST00000503144 1300 ntBASIC21.57■■□□□ 1.04
COL5A2P05997 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC21.57■■□□□ 1.04
COL5A2P05997 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
COL5A2P05997 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL5A2P05997 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
COL5A2P05997 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
COL5A2P05997 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC21.57■■□□□ 1.04
COL5A2P05997 LINC01115-203ENST00000606068 577 ntBASIC21.57■■□□□ 1.04
COL5A2P05997 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL5A2P05997 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL5A2P05997 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
COL5A2P05997 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL5A2P05997 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL5A2P05997 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC21.56■■□□□ 1.04
COL5A2P05997 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC21.56■■□□□ 1.04
COL5A2P05997 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL5A2P05997 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
COL5A2P05997 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
COL5A2P05997 Z97205.2-201ENST00000564697 1639 ntBASIC21.56■■□□□ 1.04
COL5A2P05997 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC21.56■■□□□ 1.04
COL5A2P05997 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL5A2P05997 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC21.56■■□□□ 1.04
COL5A2P05997 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
COL5A2P05997 AL442647.2-201ENST00000429864 857 ntBASIC21.56■■□□□ 1.04
COL5A2P05997 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COL5A2P05997 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC21.56■■□□□ 1.04
COL5A2P05997 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
COL5A2P05997 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL5A2P05997 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
COL5A2P05997 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC21.56■■□□□ 1.04
COL5A2P05997 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC21.56■■□□□ 1.04
COL5A2P05997 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COL5A2P05997 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC21.56■■□□□ 1.04
COL5A2P05997 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL5A2P05997 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
COL5A2P05997 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms