Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HMGN1P05114 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.18■□□□□ 0.02
HMGN1P05114 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.18■□□□□ 0.02
HMGN1P05114 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HMGN1P05114 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGN1P05114 ABCD1P5-201ENST00000445663 754 ntBASIC15.18■□□□□ 0.02
HMGN1P05114 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.18■□□□□ 0.02
HMGN1P05114 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGN1P05114 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.18■□□□□ 0.02
HMGN1P05114 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.18■□□□□ 0.02
HMGN1P05114 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.18■□□□□ 0.02
HMGN1P05114 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
HMGN1P05114 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGN1P05114 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGN1P05114 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGN1P05114 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGN1P05114 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
HMGN1P05114 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGN1P05114 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.18■□□□□ 0.02
HMGN1P05114 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HMGN1P05114 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
HMGN1P05114 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGN1P05114 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
HMGN1P05114 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
HMGN1P05114 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGN1P05114 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HMGN1P05114 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.17■□□□□ 0.02
HMGN1P05114 AL590787.1-201ENST00000568856 1315 ntBASIC15.17■□□□□ 0.02
HMGN1P05114 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
HMGN1P05114 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HMGN1P05114 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.17■□□□□ 0.02
HMGN1P05114 AC079776.2-201ENST00000641154 1609 ntBASIC15.17■□□□□ 0.02
HMGN1P05114 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGN1P05114 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGN1P05114 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.17■□□□□ 0.02
HMGN1P05114 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.17■□□□□ 0.02
HMGN1P05114 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
HMGN1P05114 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGN1P05114 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
HMGN1P05114 NORAD-201ENST00000565493 5339 ntBASIC15.17■□□□□ 0.02
HMGN1P05114 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
HMGN1P05114 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGN1P05114 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGN1P05114 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.17■□□□□ 0.02
HMGN1P05114 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGN1P05114 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGN1P05114 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGN1P05114 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGN1P05114 AL596087.1-201ENST00000400979 1969 ntBASIC15.17■□□□□ 0.02
HMGN1P05114 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGN1P05114 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGN1P05114 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HMGN1P05114 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HMGN1P05114 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
HMGN1P05114 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
HMGN1P05114 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HMGN1P05114 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.17■□□□□ 0.02
HMGN1P05114 TOP3BP1-201ENST00000420768 1380 ntBASIC15.17■□□□□ 0.02
HMGN1P05114 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGN1P05114 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HMGN1P05114 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGN1P05114 IGHV3-47-201ENST00000425060 335 ntBASIC15.17■□□□□ 0.02
HMGN1P05114 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.17■□□□□ 0.02
HMGN1P05114 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.17■□□□□ 0.02
HMGN1P05114 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.17■□□□□ 0.02
HMGN1P05114 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.17■□□□□ 0.02
HMGN1P05114 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
HMGN1P05114 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.17■□□□□ 0.02
HMGN1P05114 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
HMGN1P05114 AL353135.1-201ENST00000606729 504 ntBASIC15.17■□□□□ 0.02
HMGN1P05114 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGN1P05114 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGN1P05114 TSPY26P-202ENST00000565928 3884 ntBASIC15.17■□□□□ 0.02
HMGN1P05114 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGN1P05114 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.17■□□□□ 0.02
HMGN1P05114 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGN1P05114 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGN1P05114 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGN1P05114 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGN1P05114 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGN1P05114 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HMGN1P05114 AC005332.1-201ENST00000577698 1310 ntBASIC15.17■□□□□ 0.02
HMGN1P05114 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGN1P05114 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMGN1P05114 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMGN1P05114 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMGN1P05114 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMGN1P05114 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMGN1P05114 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMGN1P05114 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMGN1P05114 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMGN1P05114 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMGN1P05114 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMGN1P05114 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMGN1P05114 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HMGN1P05114 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HMGN1P05114 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMGN1P05114 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HMGN1P05114 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.16■□□□□ 0.02
HMGN1P05114 AC005052.1-201ENST00000625181 2492 ntBASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms